/superseal

Reference guided viral quasispecies reconstruction

Primary LanguagePythonOtherNOASSERTION

superseal

SUPERread Seed Expansion, Absorption, and Localization. A toolkit for reference-guided viral quasispecies reconstruction. Under development.

Install

Coming to soon to PyPI and Bioconda. For now:

git clone https://github.com/stephenshank/superseal
cd superseal
pip install .

Run

For a list of available options:

superseal