sunhuaiqiang

sunhuaiqiang's Stars

• BMIRDS/deepslide

  Code for the Nature Scientific Reports paper "Pathologist-level classification of histologic patterns on resected lung adenocarcinoma slides with deep neural networks." A sliding window framework for classification of high resolution whole-slide images, often microscopy or histopathology images.

  Language:Python476136

• fitushar/3D-Medical-Imaging-Preprocessing-All-you-need

  This Repo Will contain the Preprocessing Code for 3D Medical Imaging

  Language:Jupyter Notebook16835

• irinagrigorescu/generateMRsignals

  A Python tool to generate MR signals based on multi-pulse sequences (either balanced or unbalanced)

  Language:Jupyter Notebook1

• Inria-Empenn/Anima-Public

  Open source software for medical image processing from the Empenn team

  Language:C++3427

• MECLabTUDA/M3d-Cam

  Language:Python29339

• SaeedShurrab/awesome-self-supervised-learning-in-medical-imaging

  This repository is mainly dedicated for listing the recent research advancements in the application of Self-Supervised-Learning in medical images computing field

  13513

• HumanSignal/label-studio

  Label Studio is a multi-type data labeling and annotation tool with standardized output format

  Language:JavaScript17.2k2.1k

• junyuchen245/Transformer_for_medical_image_analysis

  A collection of papers about Transformer in the field of medical image analysis.

  45770

• PaddlePaddle/PaddleSeg

  Easy-to-use image segmentation library with awesome pre-trained model zoo, supporting wide-range of practical tasks in Semantic Segmentation, Interactive Segmentation, Panoptic Segmentation, Image Matting, 3D Segmentation, etc.

  Language:Python8.4k1.7k

• BubblyYi/Coronary-Artery-Tracking-via-3D-CNN-Classification

  The PyTorch re-implement of a 3D CNN Tracker to extract coronary artery centerlines with state-of-the-art (SOTA) performance. (paper: 'Coronary artery centerline extraction in cardiac CT angiography using a CNN-based orientation classifier')

  Language:Python18040

• mack-a/v2ray-agent

  Xray、Tuic、hysteria2、sing-box 八合一一键脚本

  Language:Shell13.3k4.4k

• fitushar/3D-GuidedGradCAM-for-Medical-Imaging

  This Repo containes the implemnetation of generating Guided-GradCAM for 3D medical Imaging using Nifti file in tensorflow 2.0. Different input files can be used in that case need to edit the input to the Guided-gradCAM model.

  Language:Python958

• MPI-IS/mesh

  MPI-IS Mesh Processing Library

  Language:Python641148

• PennLINC/xcpEngine

  Official public repository for the XCP Engine. This tool is deprecated in favor of XCP-D and ASLPrep.

  Language:Shell6642

• marcomusy/vedo

  A python module for scientific analysis of 3D data based on VTK and Numpy

  Language:Python2k257

• pehses/mapVBVD

  Matlab/octave tool to read twix raw data from Siemens MRI scanners.

  Language:MATLAB247

• HUANGLIZI/LViT

  [IEEE Transactions on Medical Imaging/TMI] This repo is the official implementation of "LViT: Language meets Vision Transformer in Medical Image Segmentation"

  Language:Python26525

• mlfoundations/open_clip

  An open source implementation of CLIP.

  Language:Jupyter Notebook9k898

• JunMa11/SegWithDistMap

  How Distance Transform Maps Boost Segmentation CNNs: An Empirical Study

  Language:Python36866

• JunMa11/SOTA-MedSeg

  SOTA medical image segmentation methods based on various challenges

  1.4k191

• utkuozbulak/pytorch-cnn-visualizations

  Pytorch implementation of convolutional neural network visualization techniques

  Language:Python7.8k1.5k

• eidosmontreal/shape-analysis

  MetricConv: An adaptive convolutional neural network for graphs and meshes

  Language:Python92

• d2l-ai/d2l-en

  Interactive deep learning book with multi-framework code, math, and discussions. Adopted at 500 universities from 70 countries including Stanford, MIT, Harvard, and Cambridge.

  Language:Python22.3k4.2k

• horovod/horovod

  Distributed training framework for TensorFlow, Keras, PyTorch, and Apache MXNet.

  Language:Python14.1k2.2k

• qubvel/segmentation_models.pytorch

  Semantic segmentation models with 500+ pretrained convolutional and transformer-based backbones.

  Language:Python9.1k1.6k

• AntonioLonga/PytorchGeometricTutorial

  Pytorch Geometric Tutorials

  Language:Jupyter Notebook996296

• robustml-eurecom/Vessel-Captcha

  Language:Jupyter Notebook179

• sssfearmot/SSIM-Project

  SSIM-Project

  Language:Jupyter Notebook41

• benedekrozemberczki/SimGNN

  A PyTorch implementation of "SimGNN: A Neural Network Approach to Fast Graph Similarity Computation" (WSDM 2019).

  Language:Python727146

• xmu-xiaoma666/External-Attention-pytorch

  🍀 Pytorch implementation of various Attention Mechanisms, MLP, Re-parameter, Convolution, which is helpful to further understand papers.⭐⭐⭐

  Language:Python11.1k1.9k