Pinned Repositories
3D_from_DMS_Extended_Data
about_writing
some generic (but hopefully still useful) recommendations on writing your thesis
compBiology
contact-vis
Python package for simple protein residue-residue contact map plotting.
Contact_prediction_scripts
Scripts for contact prediction
CVW_PyHP
Supplementary material for Cornell CVW on "Python for High Performance"
Data-Science--Cheat-Sheet
Cheat Sheets
DataScience-in-computational-biology
DeepDom
DeepDom is an ab-initio method for protein domain boundary prediction
esm
Evolutionary Scale Modeling (esm): Pretrained language models for proteins
sutanubh1's Repositories
sutanubh1/esm
Evolutionary Scale Modeling (esm): Pretrained language models for proteins
sutanubh1/3D_from_DMS_Extended_Data
sutanubh1/about_writing
some generic (but hopefully still useful) recommendations on writing your thesis
sutanubh1/compBiology
sutanubh1/contact-vis
Python package for simple protein residue-residue contact map plotting.
sutanubh1/Contact_prediction_scripts
Scripts for contact prediction
sutanubh1/CVW_PyHP
Supplementary material for Cornell CVW on "Python for High Performance"
sutanubh1/Data-Science--Cheat-Sheet
Cheat Sheets
sutanubh1/DeepDom
DeepDom is an ab-initio method for protein domain boundary prediction
sutanubh1/DeepMetaPSICOV
Deep ResNet-based protein contact prediction
sutanubh1/deepmind-research
This repository contains implementations and illustrative code to accompany DeepMind publications
sutanubh1/dynamic_programming
This is the code for "Dynamic Programming" by Siraj Raval on Youtube
sutanubh1/EVcouplings
Evolutionary couplings from protein and RNA sequence alignments
sutanubh1/exmachina
Sequence aligner for accurate template-based protein structure prediction
sutanubh1/GREMLIN_CPP
GREMLIN - learn MRF/potts model from input multiple sequence alignment! Implementation now available in C++ and Tensorflow/Python!
sutanubh1/home
sutanubh1/learning-bioinformatics-at-home
resources for learning bioinformatics
sutanubh1/matplotlib-tutorial
Matplotlib tutorial for beginner
sutanubh1/mfDCA
sutanubh1/ML-From-Scratch
Machine Learning From Scratch. Bare bones NumPy implementations of machine learning models and algorithms with a focus on accessibility. Aims to cover everything from data mining to deep learning.
sutanubh1/multicom
The MULTICOM protein structure system. This repository include the source code and documents of both template-based and template-free modeling of the MULTICOM protein structure prediction system. 1D feature prediction, contact prediction, and clustering-based model ranking programs are also included.
sutanubh1/PconsC4
Fast and easy contact prediction.
sutanubh1/pdbtools
A set of tools for manipulating and doing calculations on wwPDB macromolecule structure files
sutanubh1/Programming_Interview_Study_Plan
This is the Programming Interview Study Plan by Siraj Raval on Youtube
sutanubh1/prospr
ProSPr: Protein Structure Prediction
sutanubh1/prosstt-scripts
sutanubh1/python_training
sutanubh1/RaptorX-Contact
Deep residual neural network for protein contact/distance prediction developed by Xu group
sutanubh1/seaborn
Statistical data visualization using matplotlib
sutanubh1/sutanubh1.github.io