sydneycytometry/IMC-ROI-annotation

An R script to facilitate the annotation and modification of Imaging Mass Cytometry (IMC) ROI data

IMC-ROI-annotation

An R script to facilitate the annotation and modification of Imaging Mass Cytometry (IMC) ROI data

Getting started

Download script

Go to 'releases' above (https://github.com/sydneycytometry/IMC-ROI-annotation/releases) and download source code for the latest version.

Protocols

For usage instructions, Sydney Cytometry users can access the usage protocol at https://wiki.centenary.org.au/display/IMC/Data+Analysis. Non-facility users can access a copy by emailing cytof@sydneycytometry.org.au.

Citation

If you use these scripts in your work, please cite this github using the information below. You can cite the specific version that you used in your work.

Ashhurst, T. M. (2019). Imaging Mass Cytometry (IMC) region of interest (ROI) annotation v0.1. GitHub repository. https://github.com/sydneycytometry/IMC-ROI-annotation.