syparkmd

Pinned Repositories

SigProfilerExtractor
SigProfilerExtractor allows de novo extraction of mutational signatures from data generated in a matrix format. The tool identifies the number of operative mutational signatures, their activities in each sample, and the probability for each signature to cause a specific mutation type in a cancer sample. The tool makes use of SigProfilerMatrixGenerator and SigProfilerPlotting.
Language:Python154 22 21553
bios259-w24
Course material for BIOS259: The Art of Reproducible Science - A Hands-on Approach
Language:Python00
Human_Lineage_Tracing
Language:R01
LungCancer_SV_timing_analyses
Language:Python01
thyroid_cancer_one_carbon
Language:R01

syparkmd's Repositories

syparkmd/bios259-w24
Course material for BIOS259: The Art of Reproducible Science - A Hands-on Approach
Language:Python00
syparkmd/Human_Lineage_Tracing
Language:R01
syparkmd/LungCancer_SV_timing_analyses
Language:Python01
syparkmd/thyroid_cancer_one_carbon
Language:R01