SCRABBLE_PAPER

Data and analysis for the paper "Single-cell RNA-Seq imputation constrained by bulk RNA-Seq data".

This folder includes all data and R scripts or python scripts of benchmarks.They are

SimulationData_Strategy1 (Figure 2 and Supplementary Figures related to Figure 2)
SimulationData_Strategy2 (Figure 3 and Figure 5 and Supplementary Figures related to Figure 3 or Figure 5)
ES_SCRB (Figures 4A and 4B and Supplementary Figures related to Figure 4A or 4B)
E14 (Figures 4C and 4D and Supplementary Figures related to Figure 4C or 4D)
ESC_human (Figure 6 and Supplementary Figures related to Figure 6)
MCA (Figure 7 and Supplementary Figures related to Figure 7)

Help

Please feel free to contact Tao Peng (software.github@gmail.com) if you have any questions about the software.

Tao Peng et al. Single-cell RNA-Seq imputation constrained by bulk RNA-Seq data. Submitted. 2018