Pinned Repositories
cohorts
Utilities for analyzing mutations and neoepitopes in patient cohorts
discohorts
Generate Cohorts based on Epidisco and/or Biokepi results
mhctools
Python interface to running command-line and web-based MHC binding predictors
pyensembl
Python interface to access reference genome features (such as genes, transcripts, and exons) from Ensembl
topiary
Predict mutated T-cell epitopes from sequencing data
depmap-drugs
DepMap Drug Similarity Exploration
epitopehunt
Searching for epitopes
hyper
Automatically populate Google Docs with data from arbitrary URLs
mint-gifts
Track gifts (charitable and otherwise) on Mint.com
simplepythonc
Example of the simplest possible C extension for Python
tavinathanson's Repositories
tavinathanson/hyper
Automatically populate Google Docs with data from arbitrary URLs
tavinathanson/depmap-drugs
DepMap Drug Similarity Exploration
tavinathanson/wargy
Turn argparse-based Python CLI programs into beautiful, modern React+Flask web apps
tavinathanson/banana
Banana is a Chrome Extension for more accurately tracking code snippets in GitHub PR diffs.
tavinathanson/biopam
OPAM repository for bioinformatics tools.
tavinathanson/citations
tavinathanson/configs
Configs and dot files
tavinathanson/dbda
Working through Doing Bayesian Data Analysis
tavinathanson/deductible
Explain health insurance concepts
tavinathanson/edx-python-problems
edx python problem sets
tavinathanson/football-picks
Gotta choose 'em
tavinathanson/gcloud-utils
My personal utilities for Google Cloud Platform
tavinathanson/github-backup
Backup repositories
tavinathanson/gmail-extension
Extension for Gmail
tavinathanson/handson-ml
A series of Jupyter notebooks that walk you through the fundamentals of Machine Learning and Deep Learning in python using Scikit-Learn and TensorFlow.
tavinathanson/isovar
Assembly of RNA reads to determine the effect of a cancer mutation on protein sequence
tavinathanson/joinmefordinner
tavinathanson/littleclassifier
Visual classifier with metrics
tavinathanson/prettypullrequests
A chrome extension to make reviewing pull requests in Github a little easier.
tavinathanson/react-multi-select-component
Lightweight (4KB gzipped) multiple selection dropdown component
tavinathanson/react-select
The Select Component for React.js
tavinathanson/rebalance
Tools for portfolio rebalancing
tavinathanson/rtw
RTW Website
tavinathanson/rtwrsvp
RTW RSVP API
tavinathanson/stancon
Exercises from StanCon
tavinathanson/tcga-blca
Example analysis using Cohorts & TCGA-BLCA data
tavinathanson/thinkstats
Exercise from "Think Stats"
tavinathanson/travishare
Shared Travis configuration
tavinathanson/varcode
Library for manipulating genomic variants and predicting their effects
tavinathanson/vaxrank
Ranked vaccine peptides for personalized cancer immunotherapy