Simple python scripts for analysis of NGS data as required for manuscript:
Crellen, T., Allan, F., David, S., Durrant, C., Huckvale, T., Holroyd, N., Emery, A.M., Rollinson, D., Aanensen, D.M., Berriman, M. and Webster, J.P., 2016. Whole genome resequencing of the human parasite Schistosoma mansoni reveals population history and effects of selection. Scientific Reports, 6, p.20954.