tdanhorn

Pinned Repositories

bedtools2
bedtools - the swiss army knife for genome arithmetic
Language:C947 58 837287
nextflow
A DSL for data-driven computational pipelines
Language:Groovy2.8k 89 3.4k648
sarek
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
Language:Nextflow413 135 731420
smrnaseq
A small-RNA sequencing analysis pipeline
Language:Nextflow76 149 224127
anRichment
R package providing tools for enrichment calculations, access to multiple reference gene sets such as GO, KEGG, Reactome as well as more specialized collections of gene sets collected from published literature, tools for creating custom collections of reference gene sets and others.
Language:R0 1 10
Documentation
Repository holding a wiki for Research Computing tutorials
Language:Python54 13 12656
Documentation
Repository holding a wiki for Research Computing tutorials
Language:Shell00
sarek
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
Language:Nextflow00

tdanhorn's Repositories

tdanhorn/Documentation
Repository holding a wiki for Research Computing tutorials
Language:Shell00
tdanhorn/sarek
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
Language:Nextflow00