Pinned Repositories
coal_hmm_review
datarray
Prototyping numpy arrays with named axes for data management. Docs are available at URL below
dte_smartthings
SmartThings device handler for DTE Energy Bridge.
EandR-timeseries
Multi-locus analysis of evolve-and-resequence time series data.
kalmanson
psmcpp
rstviewer
Live viewer for reStructuredText (RST) documents.
stats306
Materials for the R language based course STATS 306 (Introduction to Statistical Computing).
stats504
repo
xsmc
Exact decoding of the sequentially Markov coalescent.
terhorst's Repositories
terhorst/rstviewer
Live viewer for reStructuredText (RST) documents.
terhorst/stats306
Materials for the R language based course STATS 306 (Introduction to Statistical Computing).
terhorst/xsmc
Exact decoding of the sequentially Markov coalescent.
terhorst/psmcpp
terhorst/stats504
repo
terhorst/EandR-timeseries
Multi-locus analysis of evolve-and-resequence time series data.
terhorst/coal_hmm_review
terhorst/autograd
Efficiently computes derivatives of numpy code.
terhorst/bdsky
Birth Death Serial Skyline Model for BEAST2
terhorst/bmws
terhorst/demes-python
Tools for describing and manipulating demographic models.
terhorst/Espalier
Espalier is a Python package for working with discordant phylogenetic trees using maximum agreement forests.
terhorst/expmv
MATLAB codes for matrix exponential times a vector.
terhorst/feems
terhorst/homebrew-bio
:beer::microscope: Bioinformatics formulae for the Homebrew package manager (macOS and Linux)
terhorst/HomeSpan
HomeKit Library for the Arduino-ESP32
terhorst/jax
Composable transformations of Python+NumPy programs: differentiate, vectorize, JIT to GPU/TPU, and more
terhorst/jax-flows
Normalizing Flows in JAX 🌊
terhorst/macss
terhorst/mealie
Mealie is a self hosted recipe manager and meal planner with a RestAPI backend and a reactive frontend application built in Vue for a pleasant user experience for the whole family. Easily add recipes into your database by providing the url and mealie will automatically import the relevant data or add a family recipe with the UI editor
terhorst/momi2
Infer demographic history with the Moran model
terhorst/mspsmc
terhorst/ncov
Nextstrain build for novel coronavirus SARS-CoV-2
terhorst/pystan
PyStan, the Python interface to Stan
terhorst/python-lint-action
GitHub Action for python linting with `isort` and `black`.
terhorst/smcsmc
Demographic inference from whole genomes
terhorst/snp-dists
Pairwise SNP distance matrix from a FASTA sequence alignment
terhorst/spark-on-great-lakes
terhorst/tskit_cython_example
terhorst/vimflowy
An open source productivity tool drawing inspiration from workflowy and vim