/xsmc

Exact decoding of the sequentially Markov coalescent.

Primary LanguageJupyter Notebook

Exact SMC

This packages implements methods described in the paper:

Exact decoding of the sequentially Markov coalescent
Caleb Ki, Jonathan Terhorst
bioRxiv 2020.09.21.307355; doi:10.1101/2020.09.21.307355

Please visit https://terhorst.github.io/xsmc for installation instructions and usage examples.