timholy
Neuroscientist and developer of the Julia language and its packages, including many developer tools and those of the @JuliaImages organization
Washington University in St. LouisSt. Louis, Missouri, USA
Pinned Repositories
AdvancedScientificComputing
A short course on Julia and open-source software development
Cpp.jl
Utilities for calling C++ from Julia
FlameGraphs.jl
Analysis of profiling data using trees
Grid.jl
Interpolation and related operations on grids
MethodAnalysis.jl
Utilities to analyze Julia's method tables
ProfileView.jl
Visualization of Julia profiling data
ProgressMeter.jl
Progress meter for long-running computations
QuadDIRECT.jl
Global optimization without derivatives
Rebugger.jl
An expression-level debugger for Julia with a provocative command-line (REPL) user interface
Revise.jl
Automatically update function definitions in a running Julia session
timholy's Repositories
timholy/Revise.jl
Automatically update function definitions in a running Julia session
timholy/ProgressMeter.jl
Progress meter for long-running computations
timholy/ProfileView.jl
Visualization of Julia profiling data
timholy/Rebugger.jl
An expression-level debugger for Julia with a provocative command-line (REPL) user interface
timholy/MethodAnalysis.jl
Utilities to analyze Julia's method tables
timholy/FlameGraphs.jl
Analysis of profiling data using trees
timholy/PkgCacheInspector.jl
Inspect the contents of Julia package cache files
timholy/ScheduleMeetings.jl
timholy/IRCodeInterpreter.jl
A toy demonstration of interpreter speed for JuliaCon 2024
timholy/AdmissionSuite.jl
Planning, managing, and analyzing offers of admission
timholy/AssignGroups.jl
Assign students to collaborative groups
timholy/Aqua.jl
Auto QUality Assurance for Julia packages
timholy/BioMakie.jl
Plotting and interface tools for biology.
timholy/BioStructures.jl
A Julia package to read, write and manipulate macromolecular structures (particularly proteins)
timholy/boltz
Official repository for the Boltz biomolecular interaction models
timholy/CommonWorldInvalidations.jl
Fixing the world one invalidator at a time.
timholy/Distributions.jl
A Julia package for probability distributions and associated functions.
timholy/Evolutionary.jl
Evolutionary & genetic algorithms for Julia
timholy/HomotopyContinuation.jl
A Julia package for solving systems of polynomials via homotopy continuation.
timholy/LinearOperators.jl
Linear Operators for Julia
timholy/LineSearches.jl
Line search methods for optimization and root-finding
timholy/Makie.jl
Interactive data visualizations and plotting in Julia
timholy/NLLSsolver.jl
An optimizer of robustified Non-Linear Least Squares problems
timholy/NLPModels.jl
Data Structures for Optimization Models
timholy/PDMats.jl
Uniform Interface for positive definite matrices of various structures
timholy/Pioneer.jl
timholy/PlmDCA.jl
Pseudo Likelihood Maximization for protein in Julia
timholy/PolynomialRoots.jl
Fast complex polynomial root finder, with support for arbitrary precision calculations
timholy/SparseMatricesCSR.jl
Sparse matrices in CSR format for Julia computations
timholy/ZernikePolynomials.jl
A package to work with Zernike Polynomials in the Julia programming language.