tjbencomo

MD/PhD student at UW and Fred Hutch | Computational Biology and Cancer Immunology

Pinned Repositories

bioinfo-scripts
Assortment of bioinformatics scripts
Language:Python1 2 00
bulk-rnaseq
Workflow to process bulk RNASeq samples using Salmon and DESeq2
Language:Python1 2 181
cna-pipeline
Whole exome somatic copy number analysis with Sequenza and CNVKit
Language:Python1 2 10
cs191w
Language:R10
kaplan-meier-problems
Survival data simulations to evaluate statistical power of Kaplan Meier analysis
Language:R0 2 00
ngs-pipeline
Pipeline for Somatic Variant Calling with WES and WGS data
Language:Python21 4 574
notes
Lab notes and software usage guides
0 2 01
pharmer
Python tool to convert UWSOM drug list info into Anki cards
Language:Python0 2 00
rna-pipeline
RNA sequencing pipeline for Stanford's Sherlock HPC cluster
Language:C++1 2 22
survival-talk-pntlab
Best practices for survival analysis at PNT Lab
Language:HTML3 2 01

tjbencomo's Repositories

tjbencomo/Titanic
Analysis for Kaggle Titanic Competition
Language:Jupyter Notebook1 3 12
tjbencomo/BlueprintDatathon2018
Language:Python4 0
tjbencomo/CAManager
Manager for personal certificate authorities
Language:Shell2 0
tjbencomo/DicePassCLI
Command-line interface for generating memorable word-based passphrases like with the DicePass technique
Language:Shell2 0
tjbencomo/EducationApplication
Language:Java2 0
tjbencomo/gitsocial
Add social media icons to your GitHub README files.
1 0
tjbencomo/Kaggle-House-Prices-Challenge
Language:Jupyter Notebook
tjbencomo/RandPass
A command-line interface for generating random passwords
Language:Shell2 0
tjbencomo/swift
The Swift Programming Language
Language:C++1 0
tjbencomo/Zillow-Kaggle
2 01