tlnagy/OMETIFF.jl

Issues

• Change in tiff reading since 0.3.5

  #111 opened 3 months ago by warnerwarner
  1

• Re: error with opening a ome.tiff file.

  #106 opened a year ago by mdhe1248
  8

• BoundsError when accessing Tag

  #109 opened 6 months ago by RpfR2000
  6

• TagBot trigger issue

  #79 opened 3 years ago by JuliaTagBot
  12

• Border slice lost when loading OOM multi-file image

  #104 opened 2 years ago by tlnagy
  3

• Potentially a major performance dropoff when lazy-loading multi-file OMETIFFs

  #103 opened 2 years ago by tlnagy
  1

• Opening OME TIFF files without `.ome.tif` extension

  #99 opened 2 years ago by BioTurboNick
  5

• Add DocStringExtensions compat for 0.9?

  #100 opened 2 years ago by BioTurboNick
  0

• Broken JSON metadata blocks file loading

  #98 opened 2 years ago by tlnagy
  0

• Add examples to docs

  #95 opened 3 years ago by tlnagy
  0

• Support for Big-TIFF

  #71 opened 3 years ago by JiangXL
  3

• Update strip read code on Julia 1.4

  #68 opened 3 years ago by tlnagy
  0

• Extract general TIFF code into a separate package and only keep OMETIFF specific stuff here

  #12 opened 3 years ago by tlnagy
  4

• Error in loading some images from TestImages.jl

  #91 opened 3 years ago by a-r-n-o-l-d
  3

• Large micromanager stack gives ReadOnlyMemoryError

  #90 opened 3 years ago by jowch
  7

• reduce package size

  #87 opened 3 years ago by johnnychen94
  3

• Imspectorpro ome.tif file: ERROR: KeyError: key "Type" not found

  #82 opened 3 years ago by james-a-mcmanus
  6

• suspicious ImageShow dependency

  #83 opened 3 years ago by johnnychen94
  3

• Use new runtime parsing API from unitful

  #66 opened 4 years ago by tlnagy
  0

• Tracking of IFD offset across separate files is very brittle

  #72 opened 4 years ago by tlnagy
  0

• Suitable for general use on TIFFs?

  #56 opened 5 years ago by IanButterworth
  3

• Should striping be encoded in the type?

  #69 opened 5 years ago by tlnagy
  0

• Handle cases where file is renamed and the filepath in the OME-XML is out of date

  #14 opened 5 years ago by tlnagy
  7

• DimensionMismatch("array could not be broadcast to match destination")

  #60 opened 5 years ago by JiangXL
  7

• add lazy loading of larger files/split files

  #3 opened 5 years ago by tlnagy
  2

• Add setters to memory-mapped arrays

  #52 opened 5 years ago by tlnagy
  0

• Spin out the position axis and return a list of (N-1)D images instead of a ND image

  #42 opened 5 years ago by tlnagy
  1

• document and add more examples

  #29 opened 5 years ago by tlnagy
  1

• Add option for preserving dimensions of length 1

  #45 opened 5 years ago by tlnagy
  0

• Profile loading code

  #36 opened 5 years ago by tlnagy
  3

• Use proper mapping for OME-XML time units to Unitful time units

  #32 opened 5 years ago by tlnagy
  1

• Incomplete micromanager acquisitions cause out of bounds error

  #38 opened 5 years ago by tlnagy
  0

• Add support for dumping internal micromanager imaging JSON

  #40 opened 5 years ago by tlnagy
  1

• ERROR: OMETIFF can't be installed because it has no versions that support 0.5.2 of julia

  #25 opened 5 years ago by dns43
  1

• Update to Pkg3 format

  #31 opened 5 years ago by tlnagy
  0

• Extract and report actual elapsed time information

  #27 opened 5 years ago by tlnagy
  1

• Annotate spatial axes with spatial units if available

  #26 opened 5 years ago by tlnagy
  0

• add ability to save OMETIFF files

  #30 opened 5 years ago by tlnagy
  0

• Switch to new Julian iteration protocol.

  #21 opened 6 years ago by tlnagy
  1

• In multi-position files the IFDs are sometimes intercalated so the naive next function fails

  #19 opened 6 years ago by tlnagy
  0

• Something up with MicroManager OMEs?

  #16 opened 6 years ago by rsrock
  1

• Multiple position images should have position as an extra axis

  #10 opened 7 years ago by tlnagy
  0

• ERROR: OMETIFF can't be installed because it has no versions that support 0.5.1 of julia.

  #11 opened 7 years ago by coolsecu
  3

• Test image content as well

  #9 opened 7 years ago by tlnagy
  0

• Handle imaging positions

  #5 opened 7 years ago by tlnagy
  1

• Handle multipage TIFF files

  #1 opened 7 years ago by tlnagy
  1

• Register format with FileIO.jl

  #4 opened 7 years ago by tlnagy
  0

• Add tests

  #2 opened 7 years ago by tlnagy
  0