tmbuza
Microbiome, Bioinformatics, Data Science, and Computational Biology Enthusiast, Consultant, and Mentor
Complex Data Insights
Pinned Repositories
bioinformatics-dictionary
blog
Code and other content related to Jumping Rivers blogs (https://www.jumpingrivers.com/blog/)
bookdown_template
code-1
Compilation of R and Python programming codes on the Data Professor YouTube channel.
count-dna-nt
data
datascience-skills
drug-abuse
iMAP
iMAP v1.0 (Pre-release): Integrated Microbiome Analysis Pipeline
imap-bioinformatics-qiime2
Integrated microbiome analysis pipelines with snakemake workflow.
tmbuza's Repositories
tmbuza/iMAP
iMAP v1.0 (Pre-release): Integrated Microbiome Analysis Pipeline
tmbuza/imap-bioinformatics-qiime2
Integrated microbiome analysis pipelines with snakemake workflow.
tmbuza/bioinformatics-dictionary
tmbuza/bookdown_template
tmbuza/drug-abuse
tmbuza/funModeling
R package: funModeling: data cleaning, importance variable analysis and model perfomance
tmbuza/imap-bioinformatics-mothur
Microbiome bioinformatics analysis
tmbuza/imap-bs4-template
tmbuza/imap-data-exploration
Exploring the microbiome analysis output
tmbuza/imap-data-preparation
Microbiome data cleaning, tidying and transformation
tmbuza/imap-data-processing
Preprocessing of microbiome OTU data. Involves data tidying, joining and transformation.
tmbuza/imap-download-sra-reads
Downloading fastq reads from SRA database
tmbuza/imap-essential-software
Essential software for microbiome data analysis
tmbuza/imap-machine-learning
Predictive modeling for microbiome data
tmbuza/imap-mothur-bioinformatics
Microbiome data analysis using Mothur platform
tmbuza/imap-project-overview
Overview of IMAP - Integrated Microbiome Analysis Pipelines
tmbuza/imap-qiime2-bioinformatics
tmbuza/imap-read-quality-control
Preprocessing microbiome fastq reads using Seqkit, FastQC, MultiQC, bbmap, etc.
tmbuza/imap-read-quality-control-og
Preprocessing microbiome fastq reads using Seqkit, FastQC, MultiQC, trimmomatic, kneaddata, etc.
tmbuza/imap-rproject-management
tmbuza/imap-sample-metadata
Exploring microbiome sample metadata
tmbuza/imap-sample-metadata-og
Downloading metadata from SRA database, exploration and profiling
tmbuza/imap-snakemake-workflows
Snakemake workflows for microbiome data analysis
tmbuza/imap-statistical-analysis
tmbuza/imap-viz-heatmaps
Heatmap graphs
tmbuza/microbiome-insigths
Insights into complex microbiome data
tmbuza/microbiome-pyr-visuals_backup
Microbiome data visualization
tmbuza/skills-building
Youth Empowerment
tmbuza/splice-junctions
Splice site analysis
tmbuza/youth-mentorship
Youth Future Pathways: Insights into Post-School Plans and Preparations