Pinned Repositories
All-active-Workflow
Creating the code base for All-active Model generation written on top of Bluepyopt
neuron_morphology
Tools for working with single-neuron morphological reconstructions
patchseq_human_L23
Code for reproducing the analyses presented in "Human cortical expansion involves diversification and specialization of supragranular intratelencephalic-projecting neurons".
abc_atlas_access
Documentation and examples demonstrating how to access data from the Allen Brain Cell Atlas
aisynphys
Analysis tools specific to the aiephys multipatch project.
ipfx
tmchartrand's Repositories
tmchartrand/translators
Zotero Translators
tmchartrand/abc_atlas_access
Documentation and examples demonstrating how to access data from the Allen Brain Cell Atlas
tmchartrand/aisynphys
Analysis tools specific to the aiephys multipatch project.
tmchartrand/AllenSDK
tmchartrand/argschema
This python module simplifies the development of modules that would like to define and check a particular set of input parameters, but be able to flexibly define those inputs in different ways in different contexts.
tmchartrand/BluePyOpt
Blue Brain Python Optimisation Library
tmchartrand/bmtk
Brain Modeling Toolkit
tmchartrand/codeocean_dotfiles
dotfiles for use on Code Ocean machines, managed by chezmoi
tmchartrand/eFEL
Electrophys Feature Extraction Library
tmchartrand/ipfx
tmchartrand/nest-olivemodule
Module for inferior olive modeling in NEST Simulator
tmchartrand/nest-simulator
The NEST simulator
tmchartrand/neuroanalysis
Modular analysis tools for neurophysiology data
tmchartrand/capsule-as-package-demo
demo of a Code Ocean capsule that can be imported directly as a package
tmchartrand/neuron_morphology
Tools for working with single-neuron morphological reconstructions
tmchartrand/nrn
NEURON Simulator. (iv required for the GUI)
tmchartrand/sonata
Collaboration between BBP and AIBS
tmchartrand/SWDB-2016
tmchartrand/SWDB_2019
Repository for course materials for the Summer Workshop on the Dynamic Brain 2019
tmchartrand/SWDB_2019-1
Repository for course materials for the Summer Workshop on the Dynamic Brain 2019
tmchartrand/sweep_qc_tool
manual quality control for intracellular electrophysiology experiments
tmchartrand/thalamus-merfish-analysis
Code Ocean capsule for sharing analysis of thalamus MERFISH data
tmchartrand/TReND-CaMinA
TReND school in Comp Neuro and ML
tmchartrand/x-to-nwb
Convert various patch-clamp data formats to NWBv2