cell-mechanics

There are 8 repositories under cell-mechanics topic.

AFM-analysis/PyJibe
GUI for AFM data analysis with an emphasis on biological specimens
Language:Python11 2 266
rgerum/saenopy
Semi-affine Elastic Network Optimizer to calculate forces in collagen or other biopolymer networks.
Language:Python11 4 281
davidbhr/CompactionAnalyzer
Evaluates the fiber orientation and intensity around cells that compact collagen tissue as measure of contractile strength.
Language:Python7 0 01
ZELLMECHANIK-DRESDEN/ShapeOut
Shape-Out has been superseded by Shape-Out 2.
Language:Python5 6 1945
rg314/pytraction
Bayesian Traction Force Microscopy
Language:Jupyter Notebook3 2 501
miguelatienza/onedcellsim
Language:Python1 1 00
SaradhaVenkatachalapathy/Cell_Shape_Compressive_Force_MBoC_2018
Analysis used in Damodaran et.al, Molecular Biology of the Cell , 2018
Language:R1 2 02
vi356761/Machine-learning-model-for-cellular-stress-predictions
Subroutines and functions written in MATLAB can predict stresses directly from phase images based on data trained from traction force and monolayer stress microscopy
Language:MATLAB0 1 01