ecological-modelling
There are 91 repositories under ecological-modelling topic.
vegandevs/vegan
R package for community ecologists: popular ordination methods, ecological null models & diversity analysis
nicholasjclark/mvgam
{mvgam} R 📦 to fit Dynamic Bayesian Generalized Additive Models for time series analysis and forecasting
BLayman/Artificial-Life-Simulator
An ecologically inspired multi-agent system. Agents are designed with neural network based decision making, and complex resource requirements.
nicholasjclark/physalia-forecasting-course
Ecological forecasting using Dynamic Generalized Additive Models with R 📦's {mvgam} and {brms}
LEEClab/LS_CORRIDORS
Simulation of multiple ecological functional corridors
atsa-es/atsa
Applied Time Series Analysis - course website repository.
PredictiveEcology/LandR
Landscape Ecosystem Modelling in R
mjg211/phaseR
Development version of phaseR, an R package for phase plane analysis of one- and two-dimensional autonomous ODE systems
ncx-co/ifm_deferred_harvest
Documents, Data, and Code. The NCX Methodology For Improved Forest Management (IFM) Through Short-Term Harvest Deferral.
ConFooBio/gmse
An R package for simulating Generalised Management Strategy Evaluation
oliviergimenez/capture-recapture-review
material for a review on capture-recapture methods and questions
miguel-porto/eicm
Explicit Interaction Community Models
Deltares/D-EcoImpact
A Python based kernel to perform spatial (environmental) impact assessment
open-AIMS/CoralBlox.jl
CoralBlox is a coral growth and mortality model that simulates distinct coral functional groups indirectly competing for a limited space over time. The model does not directly consider natural disturbances nor does it have representation of anthropogenic restoration and conservation activities such as coral seeding or cloud brightening.
valentinitnelav/bootstrapnet
R package for bootstrapping indices of bipartite ecological networks
boyanangelov/species2vec
Species vector representations
densitymodelling/dsmextra
Extrapolation assessments in density surface models
RussH-code/Three-Species-Lotka-Volterra-Model
Ecology modelling - 3 species LV model
atredennick/modselr
Data and function bundle for model selection guide for ecologists
OLimberger/SaFiM
A simple model for simulation of fire spread in savannas and other grass-dominated ecosystems.
Pakillo/phyloENM-TREE
Comparing independent, partial pooling, and phylogeny-informed ecological niche models
atyre2/tidypop
tidy interface to single species population models
egouldo/EcoConsQRPs
Questionable Research Practices in Ecology and Conservation
emilio-berti/assembly
The R package assembly
florent-leclercq/lotkavolterra_simulator
Simulator of the Lotka-Volterra prey-predator system with demographic and observational noise and biases
gauravsk/ecoevoapps
THIS IS A MIRROR of the development site: https://gitlab.com/ecoevoapps/ecoevoapps
KevCaz/ecoocc
:package: Occurrence / Co-occurrence / more
LukeEcomod/APES_Jan2016
APES (Atmosphere - Plant - Exchange Simulator) codes in Matlab
valentinitnelav/bootdissim
R package for building turnover saturation curves via bootstrapping
Aariq/efi-2022-phenocam
Phenocam forecasting challenge done as part of the NEFI short course in 2020 https://ecoforecast.org/nefi2022/
dinilu/dsclim
Ease the use of the climate4r package to downscale TraCE21ka and CMIP5 climate data in combination with UERRA reanalysis data.
FelixNoessler/RegionalGrasslandSim.jl
Simulation model of the biomass of grassland plant species
palmaraz/GuadalShiftR
Exploring tipping points, catastrophic bifurcations and alternative stable states in the Guadalquivir marshes
WebAxol/EvolutionSimJS
A simulator of ecosystems, where multiple species can be established and hierarchies can be built between organisms.