fcs
There are 58 repositories under fcs topic.
amices/mice
Multivariate Imputation by Chained Equations
whitews/FlowKit
A Python toolkit for flow cytometry analysis supporting GatingML and FlowJo workspaces
whitews/FlowIO
A Python library for reading and writing Flow Cytometry Standard (FCS) files
Plant-Food-Research-Open/assemblyqc
A Nextflow pipeline for evaluating assembly quality
OpenSMFS/pycorrelate
Fast and accurate cross-correlation over arbitrary time lags.
tritemio/pycorrelate
Fast and accurate cross-correlation over arbitrary time lags. Moved to:
MorganConrad/fcs
Javascript / node.js code to read FCS flow cytometry data
tlnagy/FCSFiles.jl
🧫 Read Flow Cytometry Standard (FCS) files in Julia
whitews/FlowUtils
FlowUtils is a Python package containing various utility functions related to flow cytometry analysis, primarily focused on compensation and transformation tasks commonly used within the flow community.
clarin-eric/fcs-sru-aggregator
CLARIN Federated Content Search v3 Aggregator – Augmenting your Search Engine
TAPE-Lab/CyGNAL
Pipeline for analysing and visualising CyTOF datasets, with a focus on PTM signalling networks.
oshadabasnayake/Console-Media-Player
Console Media Player with basic commands
cellengine/fcs-validator
Tool for validating FCS file specification compliance
martindisch/fcs
Low-level Flow Cytometry Standard (FCS) file serializer/deserializer
whitews/ReFlow
Django-based Repository for Flow Cytometry Data
PaulRegnier/PICAFlow
PICAFlow: a complete R workflow dedicated to flow/mass cytometry data, from data pre-processing to deep and comprehensive analysis.
czcorpus/mquery-sru
CLARIN FCS 2.0 Endpoint for Manatee-open corpus search engine
JimboMahoney/cytofclean
Fast auto-cleanup of CyTOF data
tritemio/48-pixel-SPAD-crosstalk-analysis
Optical crosstalk in SPAD arrays for high-throughput smFRET
whitews/FlowVis
A collection of visualization examples for Flow Cytometry Data
clarin-eric/fcs-misc
Specification documents, examples and schema files
INL/clariah-fcs-endpoints
REST endpoints for CLARIAH Federated Content Search
Its-OK-Wakamatsu-san/OMRON_CompoWay-F_protocol_on_Temperature_Controller_module
OMRON CompoWay/F(serial) protocol on Temperature Controller / Python
JimboMahoney/7Zip-IMD-Batch
Created to help backup data from a CyTOF system
JimboMahoney/CytobankGraphs
R Script for reading CyTOF or flow cytometry data (FCS) and generating plots like Cytobank
JimboMahoney/CytoBars
R script for summarising paramater / channel intensity from flow or mass cytometry data
JimboMahoney/CyTOF-PlotViewer
Plots log histograms of FCS files like CyTOF's PlotViewer program
Kawameicha/indexSort
Retrieve index sorted data and visually explore .fcs data files.
PLAIT-Project/AnonymizationTool
Anonymization app for project Phenotyping Lymphoma with an Artificial Intelligence Toolbox (PLAIT) based on R shiny; access website and AI via eduroam
Querela/cql-python
CQL (Contextual Query Language) Parser in Python
Querela/fcs-simple-endpoint-python
FCS SRU Simple Endpoint
shivChitinous/corr-spec
simulation of 2D diffusion on a grid to understand fluorescence correlation spectroscopy (FCS)
Th3Tr00p3r/gSTED-sFCS
Python-based control & analysis software for our optical measurement system
TheHimanshuDixit/Jiit-3rd-Sem
JIIT 3rd Sem stuff are here (Labs, Tuts, Assignment Solution)
rickert-lab/tools
useful tools for lab work