fcs-files
There are 23 repositories under fcs-files topic.
whitews/FlowKit
A Python toolkit for flow cytometry analysis supporting GatingML and FlowJo workspaces
ParkerICI/premessa
R package for pre-processing of mass and flow cytometry data
whitews/FlowIO
A Python library for reading and writing Flow Cytometry Standard (FCS) files
whitews/FlowUtils
FlowUtils is a Python package containing various utility functions related to flow cytometry analysis, primarily focused on compensation and transformation tasks commonly used within the flow community.
ParkerICI/panorama
R package for interactive visualization and analysis of single-cell data
ParkerICI/vite
R package for analysis of single-cell data using graphs
ParkerICI/grappolo
R package to cluster single-cell data and generate features that can be used for model building
whitews/ReFlow
Django-based Repository for Flow Cytometry Data
JimboMahoney/cytofclean
Fast auto-cleanup of CyTOF data
JimboMahoney/CytobankGraphs
R Script for reading CyTOF or flow cytometry data (FCS) and generating plots like Cytobank
whitews/FlowVis
A collection of visualization examples for Flow Cytometry Data
JimboMahoney/7Zip-IMD-Batch
Created to help backup data from a CyTOF system
JimboMahoney/CytoBars
R script for summarising paramater / channel intensity from flow or mass cytometry data
JimboMahoney/CyTOF-PlotViewer
Plots log histograms of FCS files like CyTOF's PlotViewer program
PaulRegnier/PICAFlow
PICAFlow: a complete R workflow dedicated to flow/mass cytometry data, from data pre-processing to deep and comprehensive analysis.
JimboMahoney/Common-FCS-Channels
Opens two or more FCS files and creates new files that contain only the Channels common to all.
JimboMahoney/FCS-Multidimensional-Scaling
Plots the MDS (Multi-dimensional scaling) of 3 or more FCS files.
JimboMahoney/FCS-Non-Redundancy-Score
Plots the NRS (non-redundancy score) of selected markers from one or more FCS files
JimboMahoney/FCS-Events
Very fast method to read number of events from some / all FCS files in a directory
JimboMahoney/FlowCytSpeed
R Script to plot the average event rate in flow or mass cytometry (FCS) files
leipzig/fcs_batch_titration
batch-titration is a container that allows for one or more fcs files to be automatically processed (using AWS Batch or other runners). It produces an html document.
leipzig/fcs_lambda
parse fcs files in s3 and store various metadata in dynamodb
leipzig/fcs_upbrowse
CytoVas fcs uploader and file browser