openms

There are 13 repositories under openms topic.

  • OpenMS/OpenMS

    The codebase of the OpenMS project

    Language:C++501293.3k348

  • OpenMS/pyopenms-docs

    pyOpenMS readthedocs documentation, additional utilities, addons, scripts, and examples.

    Language:Python471819063

  • cbielow/PTXQC

    A Quality Control (QC) pipeline for Proteomics (PTX) results generated by MaxQuant

    Language:HTML4288626

  • nf-core/mhcquant

    Identify and quantify MHC eluted peptides from mass spectrometry raw data

    Language:Nextflow33888727

  • nf-core/proteomicslfq

    Proteomics label-free quantification (LFQ) analysis pipeline

    Language:Nextflow331577220

  • nf-core/quantms

    Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Isobaric and DIA-LFQ quantification.

    Language:Nextflow3363461

  • nf-core/diaproteomics

    Automated quantitative analysis of DIA proteomics mass spectrometry measurements.

    Language:Nextflow17982613

  • saezlab/lipyd

    Python module for lipidomics LC MS/MS data analysis

    Language:Python15463

  • glyXera/glyXtoolMS

    🐍 Open-Source Software for the semi-automated analysis of glycopeptide mass spectrometry data

    Language:Python6230

  • ajmaurais/pymsConvert

    Convert between common MS data formats.

    Language:Python2100

  • proteomicsunitcrg/QCloud

    A cloud-based system to support proteomics laboratories in daily quality assessment using a user-friendly interface, easy setup, automated data processing and archiving, and unbiased instrument evaluation.

    Language:Java2250

  • ajmaurais/scanSelect

    Select specified scans and precursors from a mzML file

    Language:Python20

  • p2m2/service-flask-thermorawfileparser-openms

    A simple HTML interface for converting RAW format to MzML, MzXML, and MGF files.

    Language:Python11