Issues
- 2
Tests for the Python scripts in `./bin`
#130 opened by fabianegli - 1
Usability tests/improvements
#138 opened by jpfeuffer - 3
Do not use nextflow readLine() since it downloads files on cluster head nodes
#61 opened by harper357 - 0
- 0
Real full size data sets for AWS full tests
#39 opened by jpfeuffer - 1
Clarify/Unify exported scores
#43 opened by jpfeuffer - 7
Move most modules from local into nf-core
#63 opened by jpfeuffer - 1
- 1
fix links to TOPP tools
#141 opened by timosachsenberg - 1
- 6
URGENT: pin nf-validation version
#144 opened by nvnieuwk - 1
- 1
Post-release 1.1.1
#98 opened by fabianegli - 3
[Discussion] modification specification propagation
#104 opened by jspaezp - 1
- 1
SAGE run in a failing job
#113 opened by ypriverol - 1
Running this on Kubernetes or docker
#115 opened by aupadh12 - 2
DIA test data SDRF file is missing required column
#134 opened by harper357 - 5
- 1
error in reference_channel
#136 opened by YoujiaMa - 2
- 2
do not hardcode sdrf-pipelines version
#58 opened by fabianegli - 0
move to sdrf-pipelines version 0.0.23
#110 opened by ypriverol - 3
What is singularity_pull_docker_container?
#106 opened by jpfeuffer - 8
- 2
- 0
Post release updates
#83 opened by fabianegli - 2
Upgrade to OpenMS 1.9.1 with Comet 2023
#87 opened by ypriverol - 0
Add the Zenodo Id properly
#90 opened by ypriverol - 1
Completely overhaul conda handling
#71 opened by jpfeuffer - 1
Singularity image not available
#67 opened by adomingues - 0
Config loaded twice
#49 opened by fabianegli - 1
- 1
- 1
test configs
#46 opened by CaroAMN - 2
- 6
[BLOCKER] msstats pdfs empty
#42 opened by jpfeuffer - 1
AWS tests completely failing
#23 opened by jpfeuffer - 1
- 0
Add samplesheet schema for our SDRF input
#38 opened by jpfeuffer - 0
- 11
- 3
Msgf not working on AWS!
#25 opened by jpfeuffer - 0
Add tests for Conda
#26 opened by jpfeuffer - 1
Feature request: output search results after protein inference and filtering
#27 opened by hendrikweisser - 23