sgrna
There are 14 repositories under sgrna topic.
crisprVerse/crisprDesign
Comprehensive design of CRISPR gRNAs for nucleases and base editors
keoughkath/AlleleAnalyzer
A software tool for personalized and allele-specific CRISPR editing.
crisprVerse/crisprScore
On-Target and Off-Target Scoring Algorithms for CRISPR gRNAs
tdseher/addtag-project
CRISPR/Cas-directed HDR genome editing suite: finds+scores gRNA targets, generates donor DNAs, & produces optimal cPCR primer designs.
noamteyssier/sgcount
A flexible and fast sgRNA counter from FASTQ Files
crisprVerse/crisprDesignData
Useful human and mouse data for the crisprVerse ecosystem
crisprVerse/crisprViz
Visualization of CRISPR guide RNAs (gRNAs)
crisprVerse/crisprBowtie
Bowtie-based alignment of CRISPR gRNA spacer sequences
crisprVerse/crisprBwa
BWA-based alignment of CRISPR gRNA spacer sequences
OnlyBelter/sgRNA-lib-QC
QC CRISPR Pooled Libraries in Addgene
babinyurii/sgRNA-mismatch-activity
predicting sgRNA mismatch activity using keras
lucatorep/sgRNA_design_scripts
Script used to cdesign sgRNA sequences based on desired input parameters comparing different web-based tools
crisprVerse/crisprScoreData
Pre-trained models for the crisprScore package
drpatelh/nf-core-sgrnaquant
UNDER CONSTRUCTION: CRISPR sgRNA quantification pipeline