single-nucleotide-variation
There are 8 repositories under single-nucleotide-variation topic.
gaolabtools/scNanoGPS
Single cell Nanopore sequencing data for Genotype and Phenotype
dbmi-bgm/granite
A collection of software to work with genomic variants
davidhwyllie/findNeighbour2
Compares large numbers of bacterial sequences
davidhwyllie/findNeighbour3
Bacterial relatedness server, supporting sequence clustering & mixture detection
coldham10/SCarborSNV
SCarborSNV is an efficient algorithm for phylogeny aware genotyping of single cell genomes, using dynamic programming and neighbor joining.
alex137911/BME499
Code for 4th year honours thesis project at the University of Waterloo.
NCI-CGR/HPV_low_VAF_SNV_prediction
Predicting true low-VAF SNVs in HPV using triplicate NGS samples and machine learning