wgcna
There are 31 repositories under wgcna topic.
mortazavilab/PyWGCNA
PyWGCNA is a Python package designed to do Weighted Gene Correlation Network analysis (WGCNA)
AllenInstitute/scrattch.hicat
Hierarchical, iterative clustering for analysis of transcriptomics data in R
Lindseynicer/WGCNA_tutorial
A step-by-step tutorial for Weighted correlation network analysis (WGCNA)
ShawnWx2019/WGCNA-shinyApp
shiny app for WGCNA...
cemordaunt/comethyl
An R package for weighted region comethylation network analysis
natmurad/WGCNA
This repository contains a Script for WGCNA based on the Tutorial of WGCNA page
ParkerLab/2021_islet-rfx6
Code for Walker, Saunders, Rai et al., (2021).
rbr7/PB-Dataset-Recommender_Engine
Algorithms for NCBI, SRA, EBI datasets recommendation and how to get around with comparing your own Datasets. Recommender systems | Bio-NLP
Sciwhylab/WGCNA-Online
Online app for WGCNA Analysis
yotammarton/bioinformatics_course
GWAS of Postmortem Brain Samples Sheds Light on the Development of Schizophrenia and Bipolar Disorder
BNTechie/Bioinformatics
Differential Expression Analysis of protein, Gene set enrichment analysis, Multi-omic factor analysis, Pathway analysis, WGCNA
ConorGilesDoran/MSc_Thesis_Transcriptomics
Repository for all R scripts and results associated with my research dissertation for the MSc Bioinformatics and Computational Biology degree in University College Cork, 2022.
GTEx-etc-jusuE404/RUN-WGCNA
Wrapper R scripts for performing a weighted-gene co-expression network analysis (WGCNA)
j23414/wgcna_nf
attempt a non-bash pipeline in nextflow
Mahsa-Ehsanifard/WGCNA
Weighted Gene Co-expression Network Analysis;
roybarkan2020/Abalone-RNAseq-meta-analysis
Gene expression and network analysis for multiple RNA-seq datasets associated with heat-stress in abalone
spencer-hs/Gene-Expression-Networks-3-Brain-Region-R
Construction of Gene Expression Network across 3 brain regions in the presence of Ethanol using WGCNA in R
Angelovici-Lab/Summer_WGCNA_Discussion
The Summer_WGCNA_Discussion repository contains scripts that can perform weighted gene correlation network analysis (WGCNA).
GERMAN00VP/TFM_GERMAN_VALLEJO
My final project of the Master's in Bioinformatics and Computational Biology.
HannahJeffery1/HannahJeffery1
Personalized, annotated code for anyone working with RNA-seq data.
kornor/WGCNA_Meta-analysis_BreastCancer
WGCNA meta-analysis of two breast cancer datasets
maroonApricot/cosmos-project
Experimental code for analysis of miRNA expression in C2C12 vs. in vivo mice cells
raqmejtru/mitonuclear-sd
Investigate the role of mtDNA in the sex determination/development of Potamilus streckersoni, a freshwater mussel with doubly uniparental mitochondrial inheritance. Scripts for DESeq2, WGCNA, GSEA, AlphaFold/AlphaPulldown, and mt-sncRNA validation.
BCMSLab/aos
Code for the (unpublished) paper ( Regulation of autophagy in response to oxidative stress)
kornor/WGCNA_PDX_Dataset
Analysis of PDX BC Dataset for WGCNA module preservation
llrs/TFM
Code of my master project using WGCNA.
lucy-mhui/2024-SUDS-WGCNA
Multivariate Analysis Using Co-Expression Network Modeling Identifies Specific Inflammation and Diffusion MRI Features in Major Depressive Disorder