yeast
There are 60 repositories under yeast topic.
hendricius/the-bread-code
Learn how to master the art of baking the programmer way.
hendricius/pizza-dough
This recipe is dedicated to helping you make the best possible pizza dough for Neapolitan pizza.
SysBioChalmers/yeast-GEM
The consensus GEM for Saccharomyces cerevisiae
Pioreactor/pioreactor
Hardware and software for accessible, extensible, and scalable bioreactors. Built on Raspberry Pi.
yjx1217/LRSDAY
LRSDAY: Long-read Sequencing Data Analysis for Yeasts
chrisgilmerproj/brewday
Tools for the home brewer
Fafa87/cellstar
Algorithm for round cells identification in the brightfield microscopy images.
BrewBuddyOrg/BrewBuddy
Brouwsoftware
sboulema/BrewDB
SQLite database with beer brewing ingredients
CSB-KUL/yMap
An automated method to map yeast variants to proteins modifications and functional regions
irahorecka/sgd-rest
Saccharomyces Genome Database (SGD) REST API wrapper
ladyson1806/SerohijosLab-piQTL
GitHub Repository associated with the piQTL project (Mapping effects of genome-wide genetic variation to protein-protein interactions reveals molecular mechanisms of complex traits) [ Serohijos & Michnick Lab, Université de Montréal ]
SysBioChalmers/SLIMEr
Collection of scripts for improving lipid constraints in yeast-GEM
TomMakesThings/Genome-Sequence-Analysis-HMM
HMM for annotating coding regions of DNA in S. cerevisiae chromosome III
fg6/YeastStrainsStudy
Scripts to download the PacBio, ONT and MiSeq datasets used in https://www.nature.com/articles/s41598-017-03996-z and run the pipelines as described in the paper or simply download the final assemblies as generated by the authors.
sboulema/Hops
Website to show possible hop substitution
yeastpro/ExpressYeaself
An open source predictive model of protein expression in yeast, written in Python.
ChristophReich1996/TYC-Dataset
Official and maintained implementation of the dataset paper "The TYC Dataset for Understanding Instance-Level Semantics and Motions of Cells in Microstructures" [ICCVW 2023].
SATAY-LL/Transposonmapper
This repository contains the code for the transposonmapper package to map the transposons from the SATAY sequencing data.
y9c/scmd-calmorph
Tool for quantify morphological trait of budding yeast (fork version maintained by Chang)
YogiOnBioinformatics/Synthetic-Biology
Presentations and work done for University of Pittsburgh course, Synthetic Biology.
AnimaTardeb/Meiogenix-UGDR
UGDR: a pipeline to detect and analyze recombination in yeast.
beerproto/dataset
A collection of common datasets used for brewing.
cectri/Quantification-of-microbial-robustness
R Scripts for quantification of microbial robustness from high-throughput screenings
lil-qorgi/379-rnaseq
This is the bioinformatics workflow notebook for the analysis of wet lab-derived Candida albicans RNA-seq samples for BIOL 379.
michoel-lab/FindrCausalNetworkInferenceOnYeast
Tools for causal inference on yeast gene expression data.
nicolo-tellini/LRSDAY-Patch
Patch for LRSDAY v1.6 for Debian-based and SUSE-based OS.
rretkute/ML_gene_expression
Mathematica notebook to compare methods of ML for ribosom density on mRNA prediction
SysBioChalmers/overflow
Supplementary code and results from doi:10.1101/2020.02.20.957662
SysBioChalmers/rhto-GEM
Genome-scale metabolic model of Rhodotorula toruloides
yvan-sraka/Kombucha
Simple aliases collection for YeAST
yoavram-lab/chuong_et_al
Repo for: Chuong et al. (2024) DNA replication errors are a major source of adaptive gene amplification
zbates1/zb-deepmind-terminator
Using NVIDIA Deepmind's Nucleotide Transformer to generate embeddings for yeast genomes.
dtgreene/yan-calculator
YAN Nutrient Calculator 2.1
rraadd88/sgatools
For the analysis and visualization of array-based genetic interaction screens