traitecoevo/APCalign

Issues

• Shortening `match_taxa`

  #191 opened 7 months ago by fontikar
  0

• Add messages summarising alignments and updates

  #131 opened a year ago by ehwenk
  2

• Failing gracefully edge case

  #235 opened 5 months ago by wcornwell
  1

• Release APCalign 1.0.1

  #228 opened 5 months ago by fontikar
  1

• multicore options

  #226 opened 6 months ago by dfalster
  6

• switch arrow dependancy back to CRAN once arrow macOS binary bug is fixed

  #185 opened 6 months ago by wcornwell
  3

• `lintr` line breaks, some lines too long

  #188 opened 7 months ago by fontikar
  0

• depricated tidyselect expression

  #222 opened 7 months ago by wcornwell
  0

• rename `imprecise_fuzzy_matches` to `two_level_fuzzy`?

  #155 opened 7 months ago by wcornwell
  2

• create_taxonomic_update_lookup doesn't include `fuzzy = TRUE` argument

  #212 opened 7 months ago by ehwenk
  1

• Unexpected aligned name - old vs. new spelling

  #180 opened 7 months ago by a-orn
  12

• Swap adist for stringdist

  #215 opened 7 months ago by dfalster
  5

• Enhancement of `identifier` argument, to accept columns and not a string

  #177 opened 7 months ago by fontikar
  1

• multicore

  #162 opened 7 months ago by wcornwell
  1

• fix CRAN issue before release

  #205 opened 7 months ago by wcornwell
  5

• updating website

  #199 opened 7 months ago by wcornwell
  5

• updating families

  #195 opened 7 months ago by ehwenk
  4

• Possibly place APNI "perfect matches" ahead of APC "fuzzy matches"

  #150 opened 7 months ago by ehwenk
  1

• Not picking up lowercase genus

  #176 opened 7 months ago by ehwenk
  1

• Suggested changes to standardise names

  #197 opened 7 months ago by ehwenk
  1

• Caching UI and documentation

  #194 opened 7 months ago by wcornwell
  2

• load_taxonomic_resources is slow

  #187 opened 7 months ago by fontikar
  4

• Testing framework of benchmarks

  #190 opened 7 months ago by fontikar
  2

• NAMESPACE check Imports whole package `dplyr` vs importing specific functions

  #189 opened 7 months ago by fontikar
  5

• Planning our documentation

  #141 opened 7 months ago by fontikar
  10

• Issues with arrow on cran

  #178 opened 9 months ago by dfalster
  1

• Release APCalign 0.1.3

  #172 opened 10 months ago by fontikar
  1

• `full` argument documentation slightly wrong

  #168 opened a year ago by yangsophieee
  0

• Internet resources should fail gracefully

  #163 opened a year ago by fontikar
  1

• Establish workflow for 'output'

  #140 opened a year ago by fontikar
  0

• Getting latest release version number

  #160 opened a year ago by fontikar
  3

• draft figure--any thoughts?

  #152 opened a year ago by wcornwell
  5

• ms structure

  #142 opened a year ago by wcornwell
  8

• Genus sp. names in resources$`APC list (known names)`$canonical_name causing matching at the species level instead of genus level

  #157 opened a year ago by wcornwell
  5

• Error caused by accepted list name?

  #154 opened a year ago by yangsophieee
  12

• new repo?

  #151 opened a year ago by wcornwell
  4

• Update documentation to reflect new changes

  #123 opened a year ago by fontikar
  0

• add row_number to incoming list of names in align_names

  #146 opened a year ago by ehwenk
  3

• synonym to an "excluded" name

  #143 opened a year ago by wcornwell
  2

• `one_to_many = return_all` output design

  #120 opened a year ago by fontikar
  15

• Refinements to `collapse_to_higher_taxon`

  #127 opened a year ago by ehwenk
  9

• taxonomic_splits should have a `keep_taxonomic_splits` option

  #130 opened a year ago by ehwenk
  7

• Add option for `align_taxa` to output a subset of cols

  #132 opened a year ago by ehwenk
  0

• Need to standardise `taxon_rank` values

  #133 opened a year ago by ehwenk
  1

• Tests reorganisation and restructruring

  #135 opened a year ago by dfalster
  0

• Variable names ending with `_clean` should be `_aligned`

  #128 opened a year ago by ehwenk
  0

• error when zero species in a call match

  #129 opened a year ago by wcornwell
  3

• `taxonomic_reference` in output of align_taxa still NA

  #124 opened a year ago by fontikar
  6

• Rename output columns of update_taxonomy and create_taxononmic_update_lookup according to the table of APCalign of expected behaviour

  #121 opened a year ago by fontikar
  1

• Rename one_to_many to taxonomic_splits or something we all agree is intuitive

  #122 opened a year ago by fontikar
  2