GO Tool -- Tool for GO enrichment analysis

Donwload and Installation

Download GO tool module from github

cd /var/www/html/youSiteFolder/sites/all/modules/
git clone https://github.com/tripal/tripal_go

Install GO tool through "Administration of Modules" of Drupal.

Or install GO tool using command:

drush pm-enable tripal_go

Install below dependencies

sudo apt-get install xsltproc (ubuntu) GO::TermFinder GO::Parser map2slim

Add GO Annotation File

For some species, the

Generate GO Annotation File(GAF) for each genome. Then load the path of GAF to database.

Home -> Add Content -> GO Database

For some species, the GAF is avaiable on Downloads page of GO site.

Update GO ontology file

If you GAF file is generated base on the latest version of GO ontology file. Please update GO ontology file to latest version. The update process is just drop the latest GO ontology file to obo folder of this module.