uaf-arctic-eco-modeling/dvm-dos-tem

Issues

• Issue when running calibration for a target with [leaf,stem,root]

  #685 opened 2 months ago by valeriabriones
  1

• Heterotrophic respiration increases and doesn't drop back down post-fire

  #721 opened 5 months ago by amullen01
  11

• AVLN constant after fire

  #719 opened 5 months ago by amullen01
  0

• add/improve ``runmask.py`` filtering capability.

  #723 opened 4 months ago by tobeycarman
  0

• Improve Logging

  #717 opened 5 months ago by dogukanteber
  0

• Increase default PR year count

  #707 opened 6 months ago by rarutter
  0

• Burn-related code for severity < 0

  #706 opened 6 months ago by rarutter
  0

• Confirm that the "observation" setting in user's config (yaml) file is being honored in all cases

  #704 opened 7 months ago by jsclein-uaf
  1

• Issues/mistakes in 'original' parameter files ie CMT2,3,4,5,6,7,12,20,21,31,44

  #705 opened 6 months ago by jsclein-uaf
  5

• Confirm that the "seed path" setting in user's config (yaml) file is being honored in all cases

  #667 opened 7 months ago by tobeycarman
  4

• Let user specify formatting when printing distributions and initial guess for MADs work.

  #693 opened 7 months ago by tobeycarman
  1

• Sensitivity, fails to plot distributions if there is only a single parameter (and single PFT) specified for the run.

  #694 opened 7 months ago by tobeycarman
  1

• fix paths for building sphinx documentation

  #701 opened 7 months ago by tobeycarman
  0

• docker mapping support image fails to build - dependency resolution problem with Jinja templating library

  #691 opened 7 months ago by tobeycarman
  0

• cmt_firepar.txt file is missing data

  #664 opened 9 months ago by jsclein-uaf
  3

• Add "auxiliary outputs" concept to Sensitivity and MadsTEMDriver and associated config files.

  #672 opened 8 months ago by tobeycarman
  1

• Add recommended options for users to supply custom parameter bounds to the SA process.

  #683 opened 8 months ago by tobeycarman
  1

• SA_post_hoc_analysis, plotting save paths/locations.

  #653 opened 8 months ago by tobeycarman
  2

• another small issue with some weird quotes using --csv2fwt-v1

  #682 opened 8 months ago by jsclein-uaf
  3

• param.py - small formatting issue, in output for calibration _targets

  #681 opened 8 months ago by jsclein-uaf
  2

• ``param.py``, various errors due to malformed csv file. Poor reporting coming from ``param.py``

  #680 opened 8 months ago by tobeycarman
  0

• Unrecognized Argument in Sensitivity analysis

  #678 opened 9 months ago by valeriabriones
  1

• Write up description of recommended directory layout for a calibration project.

  #671 opened 9 months ago by tobeycarman
  1

• Add log transform to function that generates uniform sample distribution in Sensitivity.py

  #679 opened 9 months ago by tobeycarman
  0

• Bug with `PYTHONPATH` not being set for develop user in docker containers.

  #655 opened 9 months ago by tobeycarman
  1

• Bug with docker permissions for non-root users

  #658 opened 9 months ago by tobeycarman
  1

• Implement "equilibrium state" test for SA part of calibration process.

  #666 opened 9 months ago by tobeycarman
  9

• Make GCP bucket for holding test and example data.

  #645 opened 10 months ago by tobeycarman
  1

• Evaluate the possibility of removing the dsb module/flag in favor of individual flags

  #674 opened 9 months ago by rarutter
  0

• Add `--force-FRI` command line flag to main `dvmdostem` executable.

  #673 opened 9 months ago by tobeycarman
  3

• Comments and documentation for demo yaml files

  #670 opened 9 months ago by tobeycarman
  0

• `SA_post_hoc_analysis.plot_relationships(...)` change default behavior

  #654 opened 9 months ago by tobeycarman
  0

• Fix `ModuleNotFoundError` for `SA_post_hoc_analysis.plot_corr_heatmap(...)` function.

  #650 opened 9 months ago by tobeycarman
  0

• Add initial value marker to `Sensitivity.py::plot_sensitivity_matrix`

  #649 opened 9 months ago by tobeycarman
  0

• fix/improve error handling in SA_setup_and_run.py

  #647 opened 10 months ago by tobeycarman
  0

• Remove duplicate/outdated documentation and examples

  #668 opened 9 months ago by tobeycarman
  0

• Calibration/optimization workflow, need standardized methods to "export" the calibrated parameters when optimization is done.

  #669 opened 9 months ago by tobeycarman
  1

• Finish implementing `calib_mode` in `MadsTEMDriver.py`

  #648 opened 9 months ago by tobeycarman
  1

• Standardize name of the "calibration mode" setting in the yaml files that are used to control the sensitivity analysis and the mads assisted calibration.

  #646 opened 9 months ago by tobeycarman
  1

• param_util.py bug with specifying absolute vs relative paths to param files

  #659 opened 9 months ago by jsclein-uaf
  0

• `param.py --csv2fwt-v1` needs to cast some parameters to integer

  #639 opened a year ago by tobeycarman
  1

• param.py formatting problem, some numbers are needlessly in scientific notation, when they would be easier to read in standard format.

  #661 opened 9 months ago by tobeycarman
  0

• Config file backward compatibility issue run stages not correctly implemented

  #641 opened 10 months ago by Benjamin-Maglio
  3

• Soil thermal processes w/r/t/ root distribution and growing days

  #657 opened 9 months ago by rarutter
  0

• `--csv2fwt-v1` formatting is causing information loss

  #640 opened a year ago by tobeycarman
  0

• `param.py --fwt2csv-v1` not handling `fosl_burn_sev*` parameters.

  #638 opened a year ago by tobeycarman
  0

• `SA_post_hoc_analysis.plot_relationships(..)`, bug with comparing single variable and single parameter

  #652 opened 9 months ago by Benjamin-Maglio
  1

• `SA_post_hoc_analysis.plot_output_scatter(..)`, but with laying out the grid of subplots.

  #651 opened 9 months ago by tobeycarman
  1

• add save figure options to plot_output_var.py script

  #656 opened 9 months ago by tobeycarman
  0

• {Potential typo in nonvascular type in cmt_dimvegetation.txt

  #642 opened 10 months ago by valeriabriones
  1