/shared-data

Our shared data

Primary LanguageShell

UseGalaxy.* Shared Data Build Status

The central repo for the data libraries that are shared across usegalaxy.*. This is automatically updated on a weekly basis.

Design

  • We create the GTN.yaml file from bin/mergeyaml.py in the training material.
  • On our build system, on a weekly basis:

    1. We decrypt the secrets:

      {
  "eu": "xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx",
  "org": "xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx"
}

    2. We loop over the servers in servers.json, and run setup-data-libraries for each one.

    3. At the end of the loop we update the permissions on each dataset to be public, if it wasn't already.

Joining

Please email us with:

  1. An API key of a non-admin user

  2. The library ID for an already created data library

    Please create it with:

    Field Value
    Name GTN - Material
    Synopsis Galaxy Training Network Material
    Description Galaxy Training Network Material. See https://training.galaxyproject.org

  3. Your server's URL

And we can add you to this automation, and you'll always be ready to run trainings.

Updating

Run ./build.sh