Pinned Repositories
ena-cog-uk-wfs
Collection of scripts for automated SARS-CoV-2 genome surveillance.
ena-upload-cli
ENA upload tool - script your Open Data upload to the European Nucleotide Archive
environmental_impact
Environmental Impact
infrastructure
All of Galaxyproject EU's cloud infrastructure.
infrastructure-playbook
Ansible playbook for managing UseGalaxy.eu infrastructure.
project-ideas
A collection of project ideas suitable for Master and Bachelor students
sars-cov-2-processing-requests
Request execution of Galaxy SARS-CoV-2 variation analysis workflows on input data you provide.
usegalaxy-eu-tools
List of tools included in https://usegalaxy.eu
website
UseGalaxy.EU website (compiled version https://github.com/usegalaxy-eu/usegalaxy-eu.github.io)
workflow-testing
Automated testing of workflows against Galaxy
useGalaxy.eu's Repositories
usegalaxy-eu/ena-upload-cli
ENA upload tool - script your Open Data upload to the European Nucleotide Archive
usegalaxy-eu/usegalaxy-eu-tools
List of tools included in https://usegalaxy.eu
usegalaxy-eu/website
UseGalaxy.EU website (compiled version https://github.com/usegalaxy-eu/usegalaxy-eu.github.io)
usegalaxy-eu/infrastructure-playbook
Ansible playbook for managing UseGalaxy.eu infrastructure.
usegalaxy-eu/environmental_impact
Environmental Impact
usegalaxy-eu/infrastructure
All of Galaxyproject EU's cloud infrastructure.
usegalaxy-eu/galaxy-social
Repository for democratising of Galaxy's social media activity - encourage collaboration, editing, peer-review of toots 🐘 and more
usegalaxy-eu/shared-data
Our shared data
usegalaxy-eu/vgcn
Virtual Galaxy Compute Nodes (vgcn)
usegalaxy-eu/operations
usegalaxy.eu operations
usegalaxy-eu/vgcn-infrastructure
Manage the VGCN Infrastructure https://github.com/usegalaxy-eu/vgcn/
usegalaxy-eu/galaxy
Data intensive science for everyone.
usegalaxy-eu/pulsar-deployment
Various terraform stuff
usegalaxy-eu/ansible-galaxy-systemd
Ansible roles for setting up SystemD for Galaxy
usegalaxy-eu/galaxy-beacon-import
import variants from galaxy datasets to a beacon instance
usegalaxy-eu/grafana-dashboards
UseGalaxy's Grafana Dashboards
usegalaxy-eu/gdpr
Documentation regarding GDPR compliance, Privacy Policy, and ToS
usegalaxy-eu/gpu-access-sync
usegalaxy-eu/intergalactic-most-wanted-list
A database for malware checksums for use with the WallE malware cleanup script
usegalaxy-eu/PathoGFAIR
PathoGFAIR: Galaxy FAIR Workflows for Pathogen Detection and Samples Comparison
usegalaxy-eu/pulsar-network-docs
Documentation for the Galaxy Pulsar network
usegalaxy-eu/temporary-tools
Non-reproducible, local tools that were installed to cn029
usegalaxy-eu/usegalaxy-eu.github.io
Deployed website (source is in https://github.com/usegalaxy-eu/website )
usegalaxy-eu/ansible-fw-glxeu-generic
Generic firewall setup for usegalaxy-eu
usegalaxy-eu/docker-qupath
Docker image for QuPath to be used as Galaxy IT
usegalaxy-eu/galaxy-social-assistant
usegalaxy-eu/microgalaxy_technical_paper_2024
usegalaxy-eu/quota-sync
Sync responses + approvals from a Google From with quotas in a live Galaxy instance
usegalaxy-eu/tpv-metascheduler-api
Metascheduler for TPV as Service
usegalaxy-eu/WallE
Ansible role for a python script that fetches (toolname filtered) running jobs, calculates checksums for all files in the jobworking directory and compares them to a database.