usegalaxy-eu/project-ideas

Issues

• [WIP] Integrate elabftw into Galaxy

  #45 opened 7 months ago by bgruening
  0

• Metagenomic Amplicon Visualization Workflow / Tutorial

  #41 opened a year ago by paulzierep
  0

• Evaluation of a workflow to build genomes from metagenomic data

  #33 opened 2 years ago by bebatut
  0

• Combining gene cluster detection with metatranscriptomics analysis

  #37 opened 2 years ago by paulzierep
  0

• Creating a tutorial for microbiome / metagenomics data analysis

  #29 opened 3 years ago by bebatut
  1

• Design and Illustrate visually appealing poster for the Galaxy Project

  #44 opened a year ago by ElectronicBlueberry
  1

• Integrating MAPIE to have prediction intervals of classifiers and regressors to Galaxy ML tools

  #43 opened a year ago by anuprulez
  0

• Implement a Bayesian optimisation based hyperparameter search method to Galaxy machine learning tools suite

  #16 opened a year ago by anuprulez
  1

• Contribute to Open Source projects

  #42 opened a year ago by bgruening
  0

• Implementing a prototype to automatically create and display learning paths in an e-learning platform

  #23 opened a year ago by bebatut
  0

• Implementation of a pipeline for producing seasonal Arctic Sea ice forecasts using IceNet

  #35 opened a year ago by annefou
  12

• Extending API coverage of Galaxy and bioblend and comparing auto-generated language bindings with handcrafted ones.

  #39 opened a year ago by bgruening
  0

• Unified interface to different Cloud providers

  #4 opened a year ago by bgruening
  0

• Integration of BioJS into Galaxy

  #5 opened a year ago by joachimwolff
  4

• Automatic Galaxy report system

  #8 opened a year ago by bgruening
  1

• develop a notification system for the Galaxy webapp

  #27 opened a year ago by bgruening
  0

• Systematic tool testing / validation

  #40 opened a year ago by tuncK
  0

• Intelligent search for Galaxy using machine learning and search-engines

  #11 opened a year ago by anuprulez
  0

• Improving tool wrapper testing contraptions

  #38 opened 2 years ago by tuncK
  0

• Webservice to crawl/search scientific workflows globally

  #12 opened 6 years ago by bgruening
  2

• Testing and updating tutorials for data analysis

  #36 opened 2 years ago by bebatut
  0

• Implementation of ERGA genome post-assembly pipeline

  #34 opened 2 years ago by gallardoalba
  0

• Beer microbiome data analysis

  #32 opened 2 years ago by bebatut
  0

• Investigation into the selective pressures behind the reductive genome evolution of the cyanobacteria Prochlorococcus

  #3 opened 2 years ago by bebatut
  0

• Study of the genomic characteristic changes related to the reductive genome evolution of the cyanobacteria Prochlorococcus

  #2 opened 2 years ago by bebatut
  0

• Port a pipeline for microbiome data analysis to Galaxy

  #31 opened 3 years ago by bebatut
  0

• Development of a Galaxy pipeline for detection of SARS-CoV-2 variants in wastewater samples

  #30 opened 3 years ago by bebatut
  0

• Implementation of the infrastructure for an online & interactive game on DNA data analysis

  #22 opened 3 years ago by bebatut
  0

• Development of a Python tool to compare public Galaxy histories and implementation of an automated scoring system for an online & interactive game

  #28 opened 3 years ago by bebatut
  1

• Reproducing CAMI (metagenomics) challenges in Galaxy

  #24 opened 3 years ago by bebatut
  0

• Developing continuous integration tests for ansible based cloud deployments

  #13 opened 5 years ago by bgruening
  0

• Investigating and benchmarking distributed filesystems for the European Galaxy server

  #21 opened 4 years ago by bgruening
  0

• Scaling up and automating the resource allocation for global Galaxy training events

  #26 opened 3 years ago by beatrizserrano
  0

• Advanced CLI program to schedule scientific workflows across Europe

  #17 opened 3 years ago by bgruening
  1

• Chemical property prediction with machine learning on the Galaxy platform

  #18 opened 3 years ago by simonbray
  2

• Develop the infrastructure to support CAMI (metagenomics) challenges in Galaxy

  #25 opened 3 years ago by bebatut
  0

• Linkage Analysis Pipeline and Training in Galaxy

  #20 opened 5 years ago by mtekman
  1

• GGplot2 in Galaxy

  #19 opened 5 years ago by mtekman
  3

• Haplotype visualisation into Galaxy

  #15 opened 5 years ago by mtekman
  1

• Linkage Analysis Pipeline in Galaxy

  #14 opened 5 years ago by mtekman
  1

• extend, deploy and test pulsar job executions in the cloud

  #6 opened 6 years ago by bgruening
  2

• PostgreSQL analysing and optimization

  #10 opened 6 years ago by bgruening
  0

• Expand DESeq2 integration into Galaxy

  #9 opened 6 years ago by bebatut
  0

• Galaxy Docker - the compose story

  #7 opened 6 years ago by bgruening
  0