Galaxy Workflow Testing

This repository runs automated tests of several workflows against various Galaxy servers.

Testing

We are automatically running these workflows against UseGalaxy.eu, and we can test against your server too!

Workflow	UseGalaxy.EU
GraphClust2/GC-lite.ga
example1/wf3-shed-tools.ga
example2/wf4-shed-tools.ga
raceid3/raceid3_workflow.ga
sklearn/adaboost/adaboost.ga
sklearn/ard/ard.ga
training/assembly/general-introduction/assembly-general-introduction.ga
training/assembly/unicycler-assembly/unicycler.ga
training/chip-seq/formation_of_super-structures_on_xi/formation_of_super_structures_on_xi.ga
training/epigenetics/hicexplorer/hicexplorer.ga
training/epigenetics/methylation-seq/methylation-seq.ga
training/metagenomics/general-tutorial/amplicon.ga
training/proteomics/metaproteomics/metaproteomics.ga
training/proteomics/protein-id-sg-ps/protein-id-sg-ps.ga
training/proteomics/protein_quant_sil/protein_quant_sil.ga
training/sequence-analysis/mapping/mapping.ga
training/sequence-analysis/quality-control/quality_control.ga
training/sequence-analysis/ref-based-rad-seq/rad_seq_ref_based.ga
training/statistics/machine_learning/classification/linear_SVC_classification.ga
training/statistics/machine_learning/regression/gradient_boosting_regression.ga
training/transcriptomics/ref-based/ref_based.ga
training/transcriptomics/small_ncrna_clustering/blockclust_workflow.ga
training/variant-analysis/dip/diploid.ga
training/variant-analysis/mapping-by-sequencing/mapping_by_sequencing.ga
training/variant-analysis/microbial-variants/microbial_variant_calling.ga
training/proteomics/F1000_Metaproteomics_QueryTabular/F1000_Metaproteomics_QueryTabular.ga
training/proteomics/F1000_Proteogenomics_QueryTabular/F1000_Proteogenomics_QueryTabular.ga
training/transcriptomics/rna-seq-viz-with-volcanoplot/rna-seq-viz-with-volcanoplot.ga
training/transcriptomics/rna-seq-viz-with-heatmap2/rna-seq-viz-with-heatmap2.ga
training/computational-chemistry/bio3danalysis/MD_Analysis_using_Bio3D.ga
training/computational-chemistry/bio3danalysis/gromacs.ga
training/metabolomics/F1000_Metabolomics_Query_Tabular_Mass_Adjustment.ga