Pinned Repositories
adam
A genomics processing engine and specialized file format built using Apache Avro, Apache Spark and Parquet. Apache 2 licensed.
c_cram
C implementation of CRAM reader
crammer
Reference-based compression of SRA data
cramtests
DEPRECATED-api-client-java
A command line tool for Google Genomics API queries.
DEPRECATED-api-provider-local-java
An implementation of the Global Alliance Reads API which reads data from local BAM files.
ga4gh-dapi-client
An implementation for streaming client
gatk
experiments with gatk
htsjdk
A Java API for high-throughput sequencing data (HTS) formats.
ImageMagickBootrstrap
bootstrap and examples for ImageMagick C++ API
vadimzalunin's Repositories
vadimzalunin/crammer
Reference-based compression of SRA data
vadimzalunin/c_cram
C implementation of CRAM reader
vadimzalunin/cramtests
vadimzalunin/adam
A genomics processing engine and specialized file format built using Apache Avro, Apache Spark and Parquet. Apache 2 licensed.
vadimzalunin/DEPRECATED-api-client-java
A command line tool for Google Genomics API queries.
vadimzalunin/DEPRECATED-api-provider-local-java
An implementation of the Global Alliance Reads API which reads data from local BAM files.
vadimzalunin/ga4gh-dapi-client
An implementation for streaming client
vadimzalunin/gatk
experiments with gatk
vadimzalunin/htsjdk
A Java API for high-throughput sequencing data (HTS) formats.
vadimzalunin/ImageMagickBootrstrap
bootstrap and examples for ImageMagick C++ API
vadimzalunin/marginAlign
UCSC Nanopore
vadimzalunin/markup
The code we use to render README.your_favorite_markup
vadimzalunin/open-data-registry
A registry of publicly available datasets on AWS
vadimzalunin/Taxonomy_Domain_Integration
Making a Domain Map Across Approximate Metagenomic Taxonomy.
vadimzalunin/test