vanguard737's Stars
astral-sh/ruff
An extremely fast Python linter and code formatter, written in Rust.
pola-rs/polars
Dataframes powered by a multithreaded, vectorized query engine, written in Rust
dmlc/xgboost
Scalable, Portable and Distributed Gradient Boosting (GBDT, GBRT or GBM) Library, for Python, R, Java, Scala, C++ and more. Runs on single machine, Hadoop, Spark, Dask, Flink and DataFlow
pyg-team/pytorch_geometric
Graph Neural Network Library for PyTorch
searx/searx
Privacy-respecting metasearch engine
marcotcr/lime
Lime: Explaining the predictions of any machine learning classifier
pyinfra-dev/pyinfra
pyinfra turns Python code into shell commands and runs them on your servers. Execute ad-hoc commands and write declarative operations. Target SSH servers, local machine and Docker containers. Fast and scales from one server to thousands.
phlippe/uvadlc_notebooks
Repository of Jupyter notebook tutorials for teaching the Deep Learning Course at the University of Amsterdam (MSc AI), Fall 2023
chemprop/chemprop
Message Passing Neural Networks for Molecule Property Prediction
scikit-bio/scikit-bio
scikit-bio: a community-driven Python library for bioinformatics, providing versatile data structures, algorithms and educational resources.
h2oai/h2o4gpu
H2Oai GPU Edition
ViennaRNA/ViennaRNA
The ViennaRNA Package
Checkmarx/capital
A built-to-be-vulnerable API application based on the OWASP top 10 API vulnerabilities. Use c{api}tal to learn, train and exploit API Security vulnerabilities within your own API Security CTF.
jhaddix/awsScrape
A tool to scrape the AWS ranges looking for a keyword in SSL certificate data.
pola-rs/polars-book
Book documentation of the Polars DataFrame library
PacificBiosciences/trgt
Tandem repeat genotyping and visualization from PacBio HiFi data
DasLab/arnie
Python utility to estimate, compare, and reweight RNA energetics across many secondary structure algorithms.
eternagame/EternaFold
Improving RNA structure prediction through multitask learning on diverse crowdsourced data.
hendrixlab/bpRNA
bpRNA: Large-scale Annotation and Analysis of RNA Secondary Structure
DasLab/draw_rna
Draw RNA secondary structures in python.
eternagame/DegScore
Arnie-based DegScore tool.
seqcode/allo
Allo: a multi-mapped read rescue strategy for gene regulatory analyses
DasLab/RiboGraphViz
Visualize global properties of large RNAs using GraphViz force-directed layout.
eternagame/EternaBench
Evaluating RNA structure prediction using diverse thermodynamic prediction tasks and high-throughput datasets.
ratthachat/deep-rna
Easy & Pretrained SOTA Deep Learning for RNA strings
joelgrus/doing-data-science-in-the-time-of-chatgpt
talk for meetup
fukunagatsu/CapR
CapR calculates probabilities that each RNA base position is located within each secondary structural context for long RNA sequences.
BLasher113/bpRNA_align
eternagame/OpenKnotScore
scripts and examples for scoring pseudoknot designs based on chemical mapping data
ribokit/RDATKit
RNA Data (RDAT) read/write scripts