PacificBiosciences/trgt
Tandem repeat genotyping and visualization from PacBio HiFi data
RustNOASSERTION
Issues
- 2
Rust - thread panic at byte index ###
#10 opened by stacy-l - 0
Read-level data
#8 opened by hdashnow - 4
Short read data compatibility
#11 opened by JannahS - 3
- 3
support for bgzipped catalogs
#40 opened by bw2 - 2
- 4
- 3
about trgt plot on complex tr
#43 opened by WeiCSong - 1
- 0
ignore custom keys in catalog name field
#42 opened by bw2 - 4
trgt merge - skip problematic loci
#39 opened by hdashnow - 11
- 4
question about Repeat definition files
#22 opened by crazysummerW - 0
update bioconda package
#35 opened by fo40225 - 3
Recommended repeat definition file to use
#34 opened by gevro - 7
Multiple Tandem Repeat Motif
#33 opened by MKaandemir - 6
de novo repeat motifs
#32 opened by MKaandemir - 6
TRVZ v0.8.0 hmm error on some repeats
#27 opened by zbonnstetter - 1
- 4
Wrong Short Tandem Repeat size in vcf file
#30 opened by pailloufat-stack - 2
- 2
reference coordinates of pathogenic repeats
#28 opened by bw2 - 4
- 4
No genotype calls for well-covered locus
#25 opened by jlac - 1
question regarding understanding trvz plot
#24 opened by Tianyibian - 3
- 4
VCF Spec
#23 opened by themkdemiiir - 6
VCF Header Columns sample_id
#18 opened by themkdemiiir - 1
Copy number ouput in the MC Tag in Info column
#20 opened by Lionward - 8
- 1
- 3
VCF rows without genotype
#16 opened by splaisan - 5
- 0
repeat_catalog.hg38.bed to JSON format
#14 opened by YaCui - 4
How TRGT determine whether TR is homozygous or heterozygous for a diploid sample?
#13 opened by PengJia6 - 0
hg19bed
#12 opened by huangrongbioinfomation - 0
MC on the reference allele
#9 opened by hdashnow - 3
Pathogenic repeats file
#7 opened by Madelinehazel - 5
rust panic byte index
#4 opened by ljmills - 3
thread 'main' panicked at 'assertion failed
#5 opened by Nehir291 - 2
- 3
- 9
rust panic
#1 opened by hdashnow