stacy-l

phd candidate, mutation hunter. unpublished work ➡️ private repos

the wired

Pinned Repositories

datahub
JupyterHubs for use by Berkeley enrolled students
Language:Python62 6 1.7k37
compbioconnect
Materials for Berkeley Connect in Computational Biology.
10
pythonbootcamp
Files and materials for CCB Python Bootcamp.
Language:Jupyter Notebook2 1 03
blog
Language:HTML93 10 2239
Sim-it
Versatile simulator for structural variance and Nanopore/PacBio sequencing reads
Language:Perl211
trgt
Tandem repeat genotyping and visualization from PacBio HiFi data
Language:Rust98 30 387
twitter-circle
Uses Twitter archive to visualize your Twitter network based on your replies, quote tweets and direct messaging history. Get DM stats with leaderboard based on message count, bar graph of your messaging history with your friends
Language:JavaScript128 1 315
datahub
JupyterHubs for use by Berkeley enrolled students
Language:Python00
HiFiAdapterFilt
Remove CCS reads with remnant PacBio adapter sequences and convert outputs to a compressed .fastq (.fastq.gz).
Language:Shell00
snakemake_workshop
CCB Skills Seminar (Fall 2023) - snakemake
Language:Python1 1 10

stacy-l's Repositories

stacy-l/snakemake_workshop
CCB Skills Seminar (Fall 2023) - snakemake
Language:Python1 1 10
stacy-l/datahub
JupyterHubs for use by Berkeley enrolled students
Language:Python00
stacy-l/HiFiAdapterFilt
Remove CCS reads with remnant PacBio adapter sequences and convert outputs to a compressed .fastq (.fastq.gz).
Language:Shell00