Pinned Repositories
Detecting_Metastasis_Doorways_in_Breast_Cancer_with_ZeroCostDL4Mic
This is a Google Colab notebook based on ZeroCostDL4Mic for training a Deep Learning model (YOLOv2) and predicting TMEM doorways (blood vessel intravasation sites for tumor cells) in FFPE-fixed tumor tissues.
Digits_recognition_OpenCV_Python
A Google Colab notebook for recognizing LCD panel digits using OpenCV and Python
HyperStackReg
An ImageJ/FIJI plugin for multi-channel Hyperstack alignment (registration)
Invadopodia_tracker
Tracking invadopodia (fluorescent micron size dots) in time-lapse movies of cancer cells
NYC_children_lead_exposure
Exploratory Data Analysis in Python of children under 6 yrs with Elevated Blood Lead Levels (BLL)
PASCAL_VOC_xml_generator_ImageJ_Fiji
This macro converts rectangle ROIs saved in ImageJ/Fiji to Pascal VOC xml format.
Shortest_distance_between_objects
ImageJ/Fiji macros for the shortest distance measurements between two sets of objects in 2D.
SQL_BigQuery_Jupyter
Instructions for running SQL queries on BigQuery datasets from a Jupyter notebook.
ved-sharma's Repositories
ved-sharma/HyperStackReg
An ImageJ/FIJI plugin for multi-channel Hyperstack alignment (registration)
ved-sharma/Digits_recognition_OpenCV_Python
A Google Colab notebook for recognizing LCD panel digits using OpenCV and Python
ved-sharma/SQL_BigQuery_Jupyter
Instructions for running SQL queries on BigQuery datasets from a Jupyter notebook.
ved-sharma/Detecting_Metastasis_Doorways_in_Breast_Cancer_with_ZeroCostDL4Mic
This is a Google Colab notebook based on ZeroCostDL4Mic for training a Deep Learning model (YOLOv2) and predicting TMEM doorways (blood vessel intravasation sites for tumor cells) in FFPE-fixed tumor tissues.
ved-sharma/NYC_children_lead_exposure
Exploratory Data Analysis in Python of children under 6 yrs with Elevated Blood Lead Levels (BLL)
ved-sharma/Shortest_distance_between_objects
ImageJ/Fiji macros for the shortest distance measurements between two sets of objects in 2D.
ved-sharma/Invadopodia_tracker
Tracking invadopodia (fluorescent micron size dots) in time-lapse movies of cancer cells
ved-sharma/PASCAL_VOC_xml_generator_ImageJ_Fiji
This macro converts rectangle ROIs saved in ImageJ/Fiji to Pascal VOC xml format.
ved-sharma/ASL_to_English
Reads your hand signs and translates them to English words using Tensorflow object detection API
ved-sharma/BigQuery_Jupyter_notebook_setup
Instructions for connecting to Google's BigQuery API from a Jupyter notebook.
ved-sharma/Cell_Tracking
An ImageJ/Fiji macro for cell tracking in time-lapse movies
ved-sharma/Display-Microscope-Positions
This ImageJ macro displays the added positions (X,Y) on our multiphoton microscope.
ved-sharma/Downaload_YouTube_video_or_audio_using_Python
ved-sharma/every-programmer-should-know
A collection of (mostly) technical things every software developer should know about
ved-sharma/example-imagej2-command
ved-sharma/ImageAnalysis-RockefellerUniversity.github.io
Website for the Image Analysis at The Rockefeller University.
ved-sharma/ImageJ_Workshop_Mount_Sinai
Created this repo to put my slides and ImageJ/Fiji macros I demoed at this workshop.
ved-sharma/Line_following_robot
Arduino project for an autonomous line-following-robot, built from scratch...
ved-sharma/misc-batch-scripts
Some useful Windows Batch scripts
ved-sharma/PostgreSQL_server_installation
Instructions for installing PostgreSQL server on a Windows 7 64-bit computer.
ved-sharma/Sleep-computer-with-a-single-click
ved-sharma/Tableau_workbook