Add check for -m 0
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niemasd commented
I wanted to make sure all pairs of sequences were compared, so I set -m 0
, and the bealign
step completed successfully, but then tn93
crashed. When I tried running just tn93
on the temporary files, I got the following error:
tn93: error: overlap must be positive, had: 0
tn93
is also created by you it seems, so I honestly think tn93
should allow for -m 0
, but nevertheless, if an overlap of 0 is disallowed in tn93
, hivtrace
should check for -m
to be positive before doing anything so it can error out instantly