vegandevs/vegan

Issues

• Need help for understand the "alias" variables

  #612 opened a year ago
  0

• envfit question

  #611 opened a year ago
  1

• Error in if (R2.adds[best] > R2.previous && (!R2scope || R2scope && R2.adds[best] <= : missing value where TRUE/FALSE needed

  #610 opened a year ago
  4

• Trying to write a short loop using 'd' function to estimate qD for q = 0,1 and 2

  #609 opened a year ago
  2

• Error message using vegan and "shannon" index

  #608 opened a year ago
  6

• Which dissimilarity index to use

  #607 opened 9 months ago
  0

• betadisper calculate distance between samples and the centroid of a different group.

  #606 opened 3 months ago
  8

• vegan::vegist and vegan::metaMDS don't produce equivalent results

  #605 opened a year ago
  7

• Clarification of strata argument for adoinis2

  #603 opened a year ago
  0

• Scaling of Canonical Coefficients in prc() using pyrifos data set

  #602 opened 8 months ago
  3

• RDA analyses whether structural variation is used in relation to environmental studies

  #601 opened 7 months ago
  0

• how to set the parameter of strata in adonis2

  #599 opened a year ago
  0

• number of rda axes

  #598 opened 7 months ago
  4

• Different results when inputting bray curtis distance matrix vs community data matrix with method = bray

  #597 opened a year ago
  3

• Issues with rda() "triplot" vectors

  #596 opened 7 months ago
  1

• help needed to interpret Pr(>F)

  #592 opened a year ago
  0

• Please help: perMANOVA using adonis2 on RNA-Seq data

  #591 opened a year ago
  0

• Issues in fisherfit function

  #588 opened a year ago
  3

• Error in adonis: dissimilarities must be non-negative

  #587 opened a month ago
  2

• RFC: move orditkplot to vegan3d

  #585 opened 8 months ago
  1

• Values of S.chao1 & ACE bigger than total_counts

  #583 opened a month ago
  1

• RDA not considering the last environmental variable

  #581 opened a year ago
  1

• rarify breaks between version 2.6-2 and 2.6-4

  #579 opened 2 years ago
  15

• PERMANOVA on continuous variables using adonis2

  #578 opened a month ago
  0

• protest() procrustes() analysis

  #576 opened 2 years ago
  2

• PERMANOVA in adonis2: correct use of factors

  #575 opened 4 months ago
  1

• adonis2: more descriptive documentation on the data parameter

  #574 opened 2 years ago
  1

• Segfault building intro-vegan vignette on multiple OSes

  #572 opened 2 years ago
  3

• Adding matrix completion in rclr/rAitchison

  #570 opened 2 years ago
  17

• HELP

  #569 opened 2 years ago
  1

• Spatial autocorrelation in rda

  #567 opened 4 months ago
  1

• How to caculate Alpha and Beta-diversity using VEGAN?

  #563 opened 2 years ago
  1

• nested factors in how() and adonis

  #561 opened 9 months ago
  1

• [QUESTION] PROTEST implementation

  #559 opened 2 years ago
  0

• Help understanding strata option for anosim/adonis

  #553 opened 2 years ago
  0

• Aggregate function reorders groups

  #552 opened 2 years ago
  2

• Adonis2 - No residual component

  #550 opened 2 years ago
  1

• PCA (rda) with presence/absence data

  #547 opened 2 years ago
  0

• Simper gets broken by other packages

  #546 opened 2 years ago
  1

• specaccum function for the accumulation data, and what function for the species shared in the sample?

  #544 opened 2 years ago
  0

• simper no longer works with one observation per group as of 2.6-4

  #543 opened 2 years ago
  1

• Implement residualized predictor permutation as an option in `anova()`/`permutest()` methods for CCA/RDA/dbRDA

  #542 opened 7 months ago
  5

• Can you use type III errors in Adonis2()?

  #540 opened 2 years ago
  1

• bugs in adonis2() or pairwise.adonis2()

  #539 opened a month ago
  7

• IGNORE RDIFF & testing examples in CRAN release

  #538 opened a month ago
  0

• rrarefy keeping unrarefied results of samples with >depth than subsample

  #535 opened 2 years ago
  25

• Group functions on the pkgdown site Reference page

  #534 opened 2 years ago
  0

• plot.betadisper could use ordispider and or ordihull

  #533 opened 2 years ago
  0

• method for obtaining "tidy" scores seems broken?

  #532 opened 2 years ago
  2

• adonis2, multiple level factor

  #531 opened 2 years ago
  9