- Gene differential expression with DESeq2 from Python and MA plot. Recommended usage is to download R script run_deseq.r and Python script de.py, and run the latter on the command line. de_ma.py is optional and also usable on the command line. Python scripts are converted to Notebooks using jupytext.
Notebooks are distributed under the MIT License (see /LICENSE).
Copyright © 2023 Charles E. Vejnar