vgteam/vg_wdl

Issues

• Old Docker images incompatible with Singularity v4.0.3

  #147 opened a year ago by stxue1
  2

• samtools collate fails when /tmp runs out of disk space

  #148 opened 8 months ago by benjschiller
  0

• giraffe.wdl run failed with "ERROR task indexReference"

  #146 opened a year ago by gsc74
  0

• Question about pangenome files

  #142 opened 2 years ago by mariyeta
  0

• Reporting slowness of local miniwdl run

  #140 opened 2 years ago by pichuan
  0

• Synchronize indexes with `vg autoindex`, or provide an indexing WDL

  #139 opened 2 years ago by adamnovak
  0

• Give "vg_pipeline" a more-specific name

  #11 opened 6 years ago by mlin
  1

• VG construction and indexing needs decoy support

  #17 opened 6 years ago by cmarkello
  1

• repo-wide WDL conventions

  #12 opened 6 years ago by mlin
  3

• CI connecting vg_construct_and_index and vg_multicall

  #10 opened 6 years ago by mlin
  3

• Example WGS VG workflow not compatible with wdl version 1.0

  #6 opened 6 years ago by cmarkello
  1

• set up travis

  #2 opened 6 years ago by mlin
  1

• WDL requires Docker images on dockerhub

  #1 opened 6 years ago by edawson
  9