Pinned Repositories
AssemblyValidation
bio-vim
Bioinformatics support for Vim.
bioperl-live
Core BioPerl code
bioperl-run
BioPerl wrappers
CwlCmd2nf
Convert a CWL command file into a nextflow process.
docker
Collection of docker container build-files
november
A wiki engine written in Perl 6
orthomcl
Fork of orthomcl 2.0, (http://www.orthomcl.org)
viklund's Repositories
viklund/advent-of-code-2018
Advent of Code 2018 solutions
viklund/advent-of-code-2020
Advent of code 2020
viklund/advent-of-code-2021
viklund/advent-of-code-2022
Advent of code 2022
viklund/archery-log
viklund/centralized-workflow-exercise
viklund/cloud-watch
List virtual machines in the cloud
viklund/dactyl-manuform
viklund/docker-ledger
Dockerized version of https://www.ledger-cli.org/
viklund/ELIXIR-EXCELERATE-TtT
viklund/FEGA-onboarding
Collection of onboarding materials for establishing a Federated EGA Node.
viklund/git-intro
Introduction to version control with Git.
viklund/guacamole
viklund/hamster-code
Hamster wheel tooling
viklund/hamster-hugo
Hugo generator for hamster site
viklund/human-data-maturity-model
Code for the ELIXIR Human Data Maturity Model website.
viklund/hunt-the-wumpus-llm
A browser implementation of Hunt the Wumpus developed by prompting.
viklund/KubeNow
Deploy Kubernetes. Now!
viklund/kubernetes-the-hard-way
Bootstrap Kubernetes the hard way on Google Cloud Platform. No scripts.
viklund/LocalEGA-mq
LocalEGA internal message broker in a docker image
viklund/lunch-menu
Scripts for parsing the menus of the restaurants near KI and UU.
viklund/offlineimap
Read/sync your IMAP mailboxes (python2)
viklund/projplot
Code for the projplot script at UPPMAX
viklund/qmk_firmware
keyboard controller firmware for Atmel AVR and ARM USB families
viklund/rnaseq
RNA sequencing analysis pipeline using STAR, HISAT2 and Salmon with gene counts and quality control
viklund/test-travis-ci
viklund/TimeIT
The unobtrusive time tracker
viklund/travis-test-take-two
viklund/workshop-ChIP-seq
viklund/workshop-tba
NBIS Workshop in tba