/MaBoSS-Sampling

Parameter sampling for MaBoSS models

Primary LanguageC++GNU General Public License v3.0GPL-3.0

MaBoSS-Sampling Ubuntu 18.04

Parameter sampling for MaBoSS models

Compiling

make

Usage

MaBoSS-Sampling -c|--config CONF_FILE [-p|--params '$p1, $p2'] [-v|--values '0.1, 1, 10'] [-o|--output RESULT_FILE] BOOLEAN_NETWORK_FILE

MaBoSS-Sampling -c|--config CONF_FILE [-i|--input-ranges INPUT_RANGES_FILE] [-o|--output RESULT_FILE] BOOLEAN_NETWORK_FILE

MaBoSS-Sampling -c|--config CONF_FILE -s|--settings SETTINGS_FILE] [-o|--output RESULT_FILE] BOOLEAN_NETWORK_FILE

MaBoSS-Sampling [-h|--help]

Dependencies

  • g++
  • flex
  • bison
  • JsonCpp

Installing dependencies

  • Ubuntu :
apt install g++ flex bison libjsoncpp-dev
  • CentOS :
yum install gcc-c++ flex bison jsoncpp-devel