vincent-noel

Researcher in the @sysbio-curie team at Institut Curie

Institut CurieSão Paulo, Brasil/Paris, France

Pinned Repositories

COVID19
Rapid prototyping coalition for SARS-CoV-2 tissue infection dynamics. (integrated model)
Language:Jupyter Notebook22
libSigNetSim
Python library designed for building, adjusting and analyzing quantitative biological models.
Language:Python30
MaBoSS-env-2.0
Language:C++00
MaBoSS_Course
Material for MaBoSS course organized by PerMedCoE
Language:Jupyter Notebook1 3 03
PhysiCell
PhysiCell: Scientist end users should use latest release! Bugfixes should be submitted to the development branch.
Language:Jupyter Notebook00
PhysiCell-Studio
GUI application to build a PhysiCell model
Language:Python10
PhysiMESS
PhysiCell MicroEnvironment Structure Simulation
Language:C++10
pyMaBoSS
python interface for the MaBoSS software
Language:Jupyter Notebook00
SigNetSim
SigNetSim : The Signaling Network Simulator. A Web application for building, fitting, and analyzing mathematical models of molecular signaling networks.
Language:Python3 3 32
WebMaBoSS
A web interface for MaBoSS modeling
Language:JavaScript12

vincent-noel's Repositories

vincent-noel/COVID19
Rapid prototyping coalition for SARS-CoV-2 tissue infection dynamics. (integrated model)
Language:Jupyter Notebook22
vincent-noel/MaBoSS_Course
Material for MaBoSS course organized by PerMedCoE
Language:Jupyter Notebook1 3 03
vincent-noel/pb4covid19
PhysiBoSS for COVID19 simulator app for MyBinder/nanoHUB
Language:C++11
vincent-noel/PhysiCell-Studio
GUI application to build a PhysiCell model
Language:Python10
vincent-noel/PhysiMESS
PhysiCell MicroEnvironment Structure Simulation
Language:C++10
vincent-noel/SBGNRenderAPI
A simple SBGN-ML renderering API
Language:JavaScript10
vincent-noel/WebMaBoSS
A web interface for MaBoSS modeling
Language:JavaScript12
vincent-noel/libsbml-plus-packages
Conda recipe for libsbml with all packages
Language:Shell01
vincent-noel/MaBoSS-env-2.0
Language:C++00
vincent-noel/PhysiCell
PhysiCell: Scientist end users should use latest release! Bugfixes should be submitted to the development branch.
Language:Jupyter Notebook00
vincent-noel/pyMaBoSS
python interface for the MaBoSS software
Language:Jupyter Notebook00
vincent-noel/cecam23
Language:C++1
vincent-noel/coinbrew
COIN-OR build and installation script
Language:Shell
vincent-noel/colomoto-docker
The CoLoMoTo Interactive Notebook: Accessible and Reproducible Computational Analyses for Qualitative Biological Networks
Language:Jupyter Notebook1 0
vincent-noel/FromSpeciesToMaBoSSModel_BB
PerMedCoE Building block to build a MaBoSS model from a list of species
Language:Python
vincent-noel/github-repo-stats
vincent-noel/ICD_model
Language:Jupyter Notebook
vincent-noel/IndividualTrajectoryAnalysis
Language:Jupyter Notebook3 0
vincent-noel/intracellular_libs
Repo to host platform-specific libraries for intracellular solvers
Language:Python
vincent-noel/MaBoSS-Optim
Optimization of MaBoSS models
Language:C++
vincent-noel/MaBoSS-Sampling
Parameter sampling for MaBoSS models
Language:C++1
vincent-noel/PhysiCell_GPU
vincent-noel/PhysiCOOL
A generalized, model-agnostic framework for model calibration in PhysiCell.
Language:Python
vincent-noel/python-scripts
Useful Python scripts related to PhysiCell
Language:Python
vincent-noel/Reproducing_Corral
Language:Jupyter Notebook
vincent-noel/Shah-MaBoSS
Language:Jupyter Notebook
vincent-noel/staged-recipes
A place to submit conda recipes before they become fully fledged conda-forge feedstocks
Language:Python1 0
vincent-noel/UC2Workflow
Use Case 2 Workflow - Drug synergies on cell lines
Language:Python
vincent-noel/vincent-noel
vincent-noel/vincent-noel.github.io
Personal website
Language:JavaScript