Pinned Repositories
duckdb-in-ojs
use duckdb in quarto ojs blocks
epi_course_2021
Material for Epi 2021 Course
vincent-van-hoef's Repositories
vincent-van-hoef/duckdb-in-ojs
use duckdb in quarto ojs blocks
vincent-van-hoef/epi_course_2021
Material for Epi 2021 Course
vincent-van-hoef/awesome-public-datasets
A topic-centric list of HQ open datasets.
vincent-van-hoef/blog
Useful and other things.
vincent-van-hoef/CRISPR_workflow
vincent-van-hoef/d3
Sandbox for d3 visualization
vincent-van-hoef/deepvariant
Google's DeepVariant variant caller as a Nextflow pipeline
vincent-van-hoef/DockerTest
Test for docker shiny app on digital ocean
vincent-van-hoef/Docs
vincent-van-hoef/dotbash
Bash profiles and terminal settings.
vincent-van-hoef/gitpod_sandbox
Repo to play around with gitpod
vincent-van-hoef/GO
Analysis of GO enrichment
vincent-van-hoef/GrandChallenge_QC
Set of scripts to check relatedness Grand Challenge samples.
vincent-van-hoef/JamieNetwork
vincent-van-hoef/mixOmics
Development repository for the Bioconductor package 'mixOmics '
vincent-van-hoef/myFunctions
Collection of custom R functions
vincent-van-hoef/project_5507
Single-Cell analysis Mast Cells
vincent-van-hoef/project_template
Template for short term support projects
vincent-van-hoef/report_template
Template for quarto reporting in SMS projects.
vincent-van-hoef/reportjs
Helper functions for improved html reports
vincent-van-hoef/rna-seq-star-deseq2
RNA-seq workflow using STAR and DESeq2
vincent-van-hoef/RNA_Seq_Template
vincent-van-hoef/rnaseq
RNA sequencing analysis pipeline using STAR or HISAT2, with gene counts and quality control
vincent-van-hoef/RNAseqAnalysis
What the Package Does (One Line, Title Case)
vincent-van-hoef/sandbox
NextflowTests
vincent-van-hoef/singler
Description of SingleR annotation workflow on Seurat objects
vincent-van-hoef/sms5194_20_BMD
vincent-van-hoef/UMI-tools
Tools for handling Unique Molecular Identifiers in NGS data sets
vincent-van-hoef/variant_single_cell
vincent-van-hoef/workflowr_test