visze

visze's Stars

• vinta/awesome-python

  An opinionated list of awesome Python frameworks, libraries, software and resources.

  Language:Python240k6.1k025.5k

• kundajelab/deeplift

  Public facing deeplift repo

  Language:Python8523789168

• exomiser/Exomiser

  A Tool to Annotate and Prioritize Exome Variants

  Language:Java2102352054

• kircherlab/CADD-scripts

  CADD scripts release for offline scoring. For more information about CADD, please visit our website

  Language:Python7836734

• kundajelab/dfim

  Deep Feature Interaction Maps (DFIM)

  Language:Python53667

• shendurelab/MPRAflow

  A portable, flexible, parallelized tool for complete processing of massively parallel reporter assay data

  Language:Python32124616

• kircherlab/cfDNA

  cfDNA analysis workflow

  Language:Python214106

• YosefLab/MPRAnalyze

  Analyse enhancer strength based on MPRA experiments.

  Language:R127125

• Ahituv-lab/Asymmetron

  A tool to identify strand asymmetries in genomic data

  Language:HTML9602

• Phenomics/ontolib

  A modern Java library for working with (biological) ontologies.

  Language:Java93252

• kircherlab/hemoMIPs

  Automated analysis and result reporting for targeted sequencing data

  Language:Python7323

• GliozzoJ/P-Net

  R software library implementing the P-Net algorithm

  Language:R6100

• drseb/annotation-simulation

  Code to generate ontology annotated objects (e.g. HPO annotated patients)

  Language:Java2031

• DNAbased/PyFFAME

  Tool for extremely quick and customizable design of multi-allelic MPRA

  Language:Python1

• j-rosen/MPRA_UNC_Snakemake

  Snakemake pipeline for MPRA count processing

  Language:R1

• kircherlab/MPRAlib

  Language:Python11