Pinned Repositories
airspace-jekyll
A port of the Airspace theme by ThemeFisher to Jekyll.
athul
May the Force be with you :sparkles:
Awesome-Bioinformatics
A curated list of awesome Bioinformatics libraries and software.
awesome-genome-visualization
A list of interesting genome browser or genome-browser-like implementations
baltic
baltic - backronymed adaptable lightweight tree import code for molecular phylogeny manipulation, analysis and visualisation. Development is back on the evogytis/baltic branch (i.e. here).
FGF14_paper
MTU-Manuscript
SCA12-RNA-Seq-Analysis
Codes used for the data analysis and figures
STR-WARS
Short Tandem Repeat Workflow Automation Research Suite
viv3kanand's Repositories
viv3kanand/airspace-jekyll
A port of the Airspace theme by ThemeFisher to Jekyll.
viv3kanand/briatte.github.io
Single-page list of projects and contributions:
viv3kanand/conda
Specifying a conda environment with `environment.yml`
viv3kanand/CrumpLab.github.io
Lab Website
viv3kanand/cureffi
CureFFI.org
viv3kanand/Data-science
Collection of useful data science topics along with code and articles
viv3kanand/deepvariant
Google's DeepVariant variant caller as a Nextflow pipeline
viv3kanand/documentation-theme-jekyll
A Jekyll-based theme designed for documentation and help systems. See the link for detailed instructions on setting up and configuring everything.
viv3kanand/EthicalHacking
Ethical Hacking
viv3kanand/example-rmarkdown-report
An Example RMarkdown Report as Discussed on JustJensen.co
viv3kanand/facets
FireCloud implementation of FACETS
viv3kanand/iCellR
Single (i) Cell R package (iCellR) is an interactive R package to work with high-throughput single cell sequencing technologies (i.e scRNA-seq, scVDJ-seq and CITE-seq).
viv3kanand/IGIB_presentation
viv3kanand/intervene
Intervene: a tool for intersection and visualization of multiple genomic region and gene sets
viv3kanand/ivar
iVar is a computational package that contains functions broadly useful for viral amplicon-based sequencing.
viv3kanand/mag
Assembly and binning of metagenomes
viv3kanand/moalmanac-portal
A cloud-based web portal for accessible clinical interpretation of integrative cancer genomics.
viv3kanand/opentrons_covid19
Documentation and scripts for implementation of station A, B and C
viv3kanand/r
Using R with Jupyter / RStudio on Binder
viv3kanand/r4ds
R for data science: a book
viv3kanand/raphael-group.github.io
Raphael group website.
viv3kanand/SARS-CoV-2
Ongoing analysis of COVID-19 using Galaxy, BioConda and public research infrastructures
viv3kanand/SARS-Cov2_analysis
Documentation for analyzing SARS-Cov2 samples.
viv3kanand/SARS_Cov2_consensus-nf
Nextflow pipeline to analyze SARS-Cov2 Illumina SISPA and/or amplicons data
viv3kanand/sbas
CloudOS Digital Research Environment
viv3kanand/SpongeBob-Text-Analysis
A scraper to collect transcripts of episodes, movies and other medias from SpongeBob, an a simple analysis of the collected data
viv3kanand/tutorials
viv3kanand/VarCoPP
The source code of VarCoPP (i.e. the Variant Combinations Pathogenicity Predictor) that enables users to replicate the performance results that are presented in its corresponding paper.
viv3kanand/viv3kanand.github.io
viv3kanand
viv3kanand/workbench