This repository contain code and basic tutorial for "HiC1Dmetrics"
(Feb 2024) Now h1d v0.2.8 support the user-difined juicertools. You can use your own version of juicer tool by the --juicertool parameter
HiC1Dmetrics was based on python3 and released on PyPI, it could be installed by
pip install h1dAfter installation, try:
$ h1d -V
h1d version 0.1.0
For detailed usage, please refer to h1d Documents
Please click hic1d webapp
Wang J, Nakato R. HiC1Dmetrics: framework to extract various one-dimensional features from chromosome structure data. Briefings in Bioinformatics, bbab509,2021.