wdecoster/nanostat

TypeError: write_stats() got an unexpected keyword argument 'datadfs'

mroosmalen opened this issue · 3 comments

Hi Wouter

I try the run the following command:
NanoStat -t 4 --fastq reads.fastq.gz -o outputdir

But I get the an error:

Traceback (most recent call last):
  File "/hpc/cog_bioinf/kloosterman/tools/NAP_v4.0/env/bin/NanoStat", line 11, in <module>
    sys.exit(main())
  File "/hpc/cog_bioinf/kloosterman/tools/NAP_v4.0/env/lib/python3.4/site-packages/nanostat/NanoStat.py", line 81, in main
    outputfile=args.name)
TypeError: write_stats() got an unexpected keyword argument 'datadfs'

Can you help me?

Can you make sure that the nanomath submodule is the latest version?

pip install nanomath -U

Thanks, this solved the problem

Good to hear. Please let me know if you encounter any problems or if you have any feature requests or suggestions.